Cluster: MGYG000000919_CGC33
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000919
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000919_12 | MGYG000000919_12_2 | 590 | 1603 | + | 2.A.119.1.3 |
| pfam | MGYG000000919_12 | MGYG000000919_12_3 | 1643 | 1987 | + | Thioredoxin_3 |
| pfam | MGYG000000919_12 | MGYG000000919_12_4 | 2029 | 2439 | + | LMWPc |
| CAZyme | MGYG000000919_12 | MGYG000000919_12_5 | 2558 | 3706 | + | GH177 |
| STP | MGYG000000919_12 | MGYG000000919_12_6 | 3924 | 5180 | + | Pyr_redox_2 |
| TF | MGYG000000919_12 | MGYG000000919_12_7 | 5311 | 6711 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000000919_12 | MGYG000000919_12_8 | 6714 | 8471 | - | 9.B.33.1.1 |
| STP | MGYG000000919_12 | MGYG000000919_12_9 | 8668 | 10095 | + | SBP_bac_1 |
| TC | MGYG000000919_12 | MGYG000000919_12_10 | 10163 | 11107 | + | 3.A.1.1.18 |
| TC | MGYG000000919_12 | MGYG000000919_12_11 | 11104 | 11985 | + | 3.A.1.1.18 |
| pfam | MGYG000000919_12 | MGYG000000919_12_12 | 12056 | 13492 | - | MFS_2 |
| CAZyme | MGYG000000919_12 | MGYG000000919_12_13 | 13505 | 14977 | - | GH5_28 |
Gene ID: MGYG000000919_12_2
Type: TC
Location: 590 - 1603 (+)
Type: TC
Location: 590 - 1603 (+)
Gene ID: MGYG000000919_12_3
Type: pfam
Location: 1643 - 1987 (+)
Type: pfam
Location: 1643 - 1987 (+)
Gene ID: MGYG000000919_12_4
Type: pfam
Location: 2029 - 2439 (+)
Type: pfam
Location: 2029 - 2439 (+)
Gene ID: MGYG000000919_12_5
Type: CAZyme
Location: 2558 - 3706 (+)
Type: CAZyme
Location: 2558 - 3706 (+)
Gene ID: MGYG000000919_12_6
Type: STP
Location: 3924 - 5180 (+)
Type: STP
Location: 3924 - 5180 (+)
Gene ID: MGYG000000919_12_7
Type: TF
Location: 5311 - 6711 (-)
Type: TF
Location: 5311 - 6711 (-)
Gene ID: MGYG000000919_12_8
Type: TC
Location: 6714 - 8471 (-)
Type: TC
Location: 6714 - 8471 (-)
Gene ID: MGYG000000919_12_9
Type: STP
Location: 8668 - 10095 (+)
Type: STP
Location: 8668 - 10095 (+)
Gene ID: MGYG000000919_12_10
Type: TC
Location: 10163 - 11107 (+)
Type: TC
Location: 10163 - 11107 (+)
Gene ID: MGYG000000919_12_11
Type: TC
Location: 11104 - 11985 (+)
Type: TC
Location: 11104 - 11985 (+)
Gene ID: MGYG000000919_12_12
Type: pfam
Location: 12056 - 13492 (-)
Type: pfam
Location: 12056 - 13492 (-)
Gene ID: MGYG000000919_12_13
Type: CAZyme
Location: 13505 - 14977 (-)
Type: CAZyme
Location: 13505 - 14977 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.