Cluster: MGYG000000919_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000000919
- CGC Family ID: CGCFAM_00458
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000919_1 | MGYG000000919_1_201 | 232176 | 233237 | - | 3.A.1.6.3 |
| TC | MGYG000000919_1 | MGYG000000919_1_202 | 233241 | 234068 | - | 3.A.1.6.1 |
| TC | MGYG000000919_1 | MGYG000000919_1_203 | 234076 | 234900 | - | 3.A.1.6.1 |
| TC | MGYG000000919_1 | MGYG000000919_1_204 | 234920 | 235984 | - | 3.A.1.6.1 |
| CAZyme | MGYG000000919_1 | MGYG000000919_1_205 | 236179 | 237783 | - | CBM91 | GH43_10 |
| STP | MGYG000000919_1 | MGYG000000919_1_206 | 237987 | 239480 | - | SBP_bac_1 |
| TC | MGYG000000919_1 | MGYG000000919_1_207 | 239515 | 240384 | - | 3.A.1.1.29 |
| TC | MGYG000000919_1 | MGYG000000919_1_208 | 240399 | 241349 | - | 3.A.1.1.10 |
| TF | MGYG000000919_1 | MGYG000000919_1_209 | 241585 | 243852 | - | HTH_AraC |
| CAZyme | MGYG000000919_1 | MGYG000000919_1_210 | 243946 | 244611 | - | CE12 |
| CAZyme | MGYG000000919_1 | MGYG000000919_1_211 | 244623 | 246530 | - | CBM91 | GH43_12 |
| CAZyme | MGYG000000919_1 | MGYG000000919_1_212 | 246523 | 247656 | - | GH105 |
| CAZyme | MGYG000000919_1 | MGYG000000919_1_213 | 247670 | 249238 | - | GH28 |
Gene ID: MGYG000000919_1_201
Type: TC
Location: 232176 - 233237 (-)
Type: TC
Location: 232176 - 233237 (-)
Gene ID: MGYG000000919_1_202
Type: TC
Location: 233241 - 234068 (-)
Type: TC
Location: 233241 - 234068 (-)
Gene ID: MGYG000000919_1_203
Type: TC
Location: 234076 - 234900 (-)
Type: TC
Location: 234076 - 234900 (-)
Gene ID: MGYG000000919_1_204
Type: TC
Location: 234920 - 235984 (-)
Type: TC
Location: 234920 - 235984 (-)
Gene ID: MGYG000000919_1_205
Type: CAZyme
Location: 236179 - 237783 (-)
Type: CAZyme
Location: 236179 - 237783 (-)
Gene ID: MGYG000000919_1_206
Type: STP
Location: 237987 - 239480 (-)
Type: STP
Location: 237987 - 239480 (-)
Gene ID: MGYG000000919_1_207
Type: TC
Location: 239515 - 240384 (-)
Type: TC
Location: 239515 - 240384 (-)
Gene ID: MGYG000000919_1_208
Type: TC
Location: 240399 - 241349 (-)
Type: TC
Location: 240399 - 241349 (-)
Gene ID: MGYG000000919_1_209
Type: TF
Location: 241585 - 243852 (-)
Type: TF
Location: 241585 - 243852 (-)
Gene ID: MGYG000000919_1_210
Type: CAZyme
Location: 243946 - 244611 (-)
Type: CAZyme
Location: 243946 - 244611 (-)
Gene ID: MGYG000000919_1_211
Type: CAZyme
Location: 244623 - 246530 (-)
Type: CAZyme
Location: 244623 - 246530 (-)
Gene ID: MGYG000000919_1_212
Type: CAZyme
Location: 246523 - 247656 (-)
Type: CAZyme
Location: 246523 - 247656 (-)
Gene ID: MGYG000000919_1_213
Type: CAZyme
Location: 247670 - 249238 (-)
Type: CAZyme
Location: 247670 - 249238 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.