Cluster: MGYG000000919_CGC27
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000919
- CGC Family ID: CGCFAM_10032
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000919_8 | MGYG000000919_8_130 | 150508 | 152391 | + | 8.A.59.2.1 |
| TF | MGYG000000919_8 | MGYG000000919_8_131 | 152404 | 153189 | + | HTH_AraC |
| STP | MGYG000000919_8 | MGYG000000919_8_132 | 153475 | 154803 | + | SBP_bac_1 |
| TC | MGYG000000919_8 | MGYG000000919_8_133 | 154926 | 155795 | + | 3.A.1.1.20 |
| TC | MGYG000000919_8 | MGYG000000919_8_134 | 155827 | 156717 | + | 3.A.1.1.18 |
| pfam | MGYG000000919_8 | MGYG000000919_8_135 | 156775 | 158187 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | MGYG000000919_8 | MGYG000000919_8_136 | 158479 | 160086 | + | GH3 |
| CAZyme | MGYG000000919_8 | MGYG000000919_8_137 | 160215 | 162830 | + | GH94 |
| CAZyme | MGYG000000919_8 | MGYG000000919_8_138 | 162917 | 164068 | + | CE9 |
| pfam | MGYG000000919_8 | MGYG000000919_8_139 | 164055 | 164819 | + | Glucosamine_iso |
| STP | MGYG000000919_8 | MGYG000000919_8_140 | 165058 | 165315 | + | PTS-HPr |
| TC | MGYG000000919_8 | MGYG000000919_8_141 | 165334 | 166983 | + | 8.A.7.1.1 |
| pfam | MGYG000000919_8 | MGYG000000919_8_142 | 166996 | 167844 | + | PRD | PRD | CAT_RBD |
| TC | MGYG000000919_8 | MGYG000000919_8_143 | 167868 | 168350 | + | 4.A.1.1.1 |
| peptidase | MGYG000000919_8 | MGYG000000919_8_144 | 168712 | 169479 | + | C40.UPW |
| CAZyme | MGYG000000919_8 | MGYG000000919_8_145 | 169655 | 170374 | + | CE4 |
Gene ID: MGYG000000919_8_130
Type: TC
Location: 150508 - 152391 (+)
Type: TC
Location: 150508 - 152391 (+)
Gene ID: MGYG000000919_8_131
Type: TF
Location: 152404 - 153189 (+)
Type: TF
Location: 152404 - 153189 (+)
Gene ID: MGYG000000919_8_132
Type: STP
Location: 153475 - 154803 (+)
Type: STP
Location: 153475 - 154803 (+)
Gene ID: MGYG000000919_8_133
Type: TC
Location: 154926 - 155795 (+)
Type: TC
Location: 154926 - 155795 (+)
Gene ID: MGYG000000919_8_134
Type: TC
Location: 155827 - 156717 (+)
Type: TC
Location: 155827 - 156717 (+)
Gene ID: MGYG000000919_8_135
Type: pfam
Location: 156775 - 158187 (+)
Type: pfam
Location: 156775 - 158187 (+)
Gene ID: MGYG000000919_8_136
Type: CAZyme
Location: 158479 - 160086 (+)
Type: CAZyme
Location: 158479 - 160086 (+)
Gene ID: MGYG000000919_8_137
Type: CAZyme
Location: 160215 - 162830 (+)
Type: CAZyme
Location: 160215 - 162830 (+)
Gene ID: MGYG000000919_8_138
Type: CAZyme
Location: 162917 - 164068 (+)
Type: CAZyme
Location: 162917 - 164068 (+)
Gene ID: MGYG000000919_8_139
Type: pfam
Location: 164055 - 164819 (+)
Type: pfam
Location: 164055 - 164819 (+)
Gene ID: MGYG000000919_8_140
Type: STP
Location: 165058 - 165315 (+)
Type: STP
Location: 165058 - 165315 (+)
Gene ID: MGYG000000919_8_141
Type: TC
Location: 165334 - 166983 (+)
Type: TC
Location: 165334 - 166983 (+)
Gene ID: MGYG000000919_8_142
Type: pfam
Location: 166996 - 167844 (+)
Type: pfam
Location: 166996 - 167844 (+)
Gene ID: MGYG000000919_8_143
Type: TC
Location: 167868 - 168350 (+)
Type: TC
Location: 167868 - 168350 (+)
Gene ID: MGYG000000919_8_144
Type: peptidase
Location: 168712 - 169479 (+)
Type: peptidase
Location: 168712 - 169479 (+)
Gene ID: MGYG000000919_8_145
Type: CAZyme
Location: 169655 - 170374 (+)
Type: CAZyme
Location: 169655 - 170374 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.