Cluster: MGYG000000919_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000919
- CGC Family ID: CGCFAM_00063
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000919_6 | MGYG000000919_6_177 | 204469 | 206247 | - | 3.A.1.106.3 |
| TC | MGYG000000919_6 | MGYG000000919_6_178 | 206248 | 207993 | - | 3.A.1.106.3 |
| TF | MGYG000000919_6 | MGYG000000919_6_179 | 208146 | 209027 | + | HTH_AraC |
| CAZyme | MGYG000000919_6 | MGYG000000919_6_180 | 209044 | 210636 | + | GH13_36 |
| TF | MGYG000000919_6 | MGYG000000919_6_181 | 210837 | 211853 | + | LacI |
| CAZyme | MGYG000000919_6 | MGYG000000919_6_182 | 212338 | 214710 | + | GT35 |
Gene ID: MGYG000000919_6_177
Type: TC
Location: 204469 - 206247 (-)
Type: TC
Location: 204469 - 206247 (-)
Gene ID: MGYG000000919_6_178
Type: TC
Location: 206248 - 207993 (-)
Type: TC
Location: 206248 - 207993 (-)
Gene ID: MGYG000000919_6_179
Type: TF
Location: 208146 - 209027 (+)
Type: TF
Location: 208146 - 209027 (+)
Gene ID: MGYG000000919_6_180
Type: CAZyme
Location: 209044 - 210636 (+)
Type: CAZyme
Location: 209044 - 210636 (+)
Gene ID: MGYG000000919_6_181
Type: TF
Location: 210837 - 211853 (+)
Type: TF
Location: 210837 - 211853 (+)
Gene ID: MGYG000000919_6_182
Type: CAZyme
Location: 212338 - 214710 (+)
Type: CAZyme
Location: 212338 - 214710 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.