Cluster: MGYG000000919_CGC22
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000919
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000919_6 | MGYG000000919_6_57 | 67020 | 67664 | + | 9.B.18.1.3 |
| pfam | MGYG000000919_6 | MGYG000000919_6_58 | 67668 | 68531 | + | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | MGYG000000919_6 | MGYG000000919_6_59 | 68536 | 69756 | + | GT4 |
| TC | MGYG000000919_6 | MGYG000000919_6_60 | 69779 | 70798 | + | 9.B.18.2.1 |
| pfam | MGYG000000919_6 | MGYG000000919_6_61 | 70798 | 71910 | + | Epimerase | Polysacc_synt_C |
| pfam | MGYG000000919_6 | MGYG000000919_6_62 | 71914 | 73038 | + | Epimerase_2 |
| CAZyme | MGYG000000919_6 | MGYG000000919_6_63 | 73060 | 73923 | + | GT2 |
| NULL(UNKNOWN) | MGYG000000919_6 | MGYG000000919_6_64 | 73946 | 75013 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000000919_6 | MGYG000000919_6_65 | 75015 | 76433 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000919_6 | MGYG000000919_6_66 | 76430 | 77542 | + | GT4 |
| TC | MGYG000000919_6 | MGYG000000919_6_67 | 77543 | 78799 | + | 2.A.66.2.15 |
Gene ID: MGYG000000919_6_57
Type: TC
Location: 67020 - 67664 (+)
Type: TC
Location: 67020 - 67664 (+)
Gene ID: MGYG000000919_6_58
Type: pfam
Location: 67668 - 68531 (+)
Type: pfam
Location: 67668 - 68531 (+)
Gene ID: MGYG000000919_6_59
Type: CAZyme
Location: 68536 - 69756 (+)
Type: CAZyme
Location: 68536 - 69756 (+)
Gene ID: MGYG000000919_6_60
Type: TC
Location: 69779 - 70798 (+)
Type: TC
Location: 69779 - 70798 (+)
Gene ID: MGYG000000919_6_61
Type: pfam
Location: 70798 - 71910 (+)
Type: pfam
Location: 70798 - 71910 (+)
Gene ID: MGYG000000919_6_62
Type: pfam
Location: 71914 - 73038 (+)
Type: pfam
Location: 71914 - 73038 (+)
Gene ID: MGYG000000919_6_63
Type: CAZyme
Location: 73060 - 73923 (+)
Type: CAZyme
Location: 73060 - 73923 (+)
Gene ID: MGYG000000919_6_64
Type:
Location: 73946 - 75013 (+)
Type:
Location: 73946 - 75013 (+)
Gene ID: MGYG000000919_6_65
Type:
Location: 75015 - 76433 (+)
Type:
Location: 75015 - 76433 (+)
Gene ID: MGYG000000919_6_66
Type: CAZyme
Location: 76430 - 77542 (+)
Type: CAZyme
Location: 76430 - 77542 (+)
Gene ID: MGYG000000919_6_67
Type: TC
Location: 77543 - 78799 (+)
Type: TC
Location: 77543 - 78799 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.