Cluster: MGYG000000919_CGC15
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000919
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000919_5 | MGYG000000919_5_44 | 52519 | 53172 | - | 2.A.115.2.12 |
| CAZyme | MGYG000000919_5 | MGYG000000919_5_45 | 53239 | 55521 | - | GH146 |
| TC | MGYG000000919_5 | MGYG000000919_5_46 | 55806 | 56828 | - | 3.A.1.2.14 |
| TC | MGYG000000919_5 | MGYG000000919_5_47 | 56825 | 57880 | - | 3.A.1.2.25 |
| TC | MGYG000000919_5 | MGYG000000919_5_48 | 57873 | 59402 | - | 3.A.1.2.25 |
| TC | MGYG000000919_5 | MGYG000000919_5_49 | 59491 | 60579 | - | 3.A.1.2.14 |
| TC | MGYG000000919_5 | MGYG000000919_5_50 | 60742 | 62199 | - | 8.A.59.2.1 |
| TF | MGYG000000919_5 | MGYG000000919_5_51 | 62201 | 63805 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000000919_5 | MGYG000000919_5_52 | 64111 | 64941 | - | 3.A.1.1.20 |
| TC | MGYG000000919_5 | MGYG000000919_5_53 | 64944 | 65846 | - | 3.A.1.1.4 |
| STP | MGYG000000919_5 | MGYG000000919_5_54 | 65871 | 67385 | - | SBP_bac_1 |
| CAZyme | MGYG000000919_5 | MGYG000000919_5_55 | 67416 | 68369 | - | GH43_26 |
| CAZyme | MGYG000000919_5 | MGYG000000919_5_56 | 68417 | 69922 | - | GH51_1 |
| pfam | MGYG000000919_5 | MGYG000000919_5_57 | 69986 | 70240 | - | DUF6171 |
| TF | MGYG000000919_5 | MGYG000000919_5_58 | 70688 | 71614 | - | HTH_5 |
| CAZyme | MGYG000000919_5 | MGYG000000919_5_59 | 71711 | 73210 | - | GH43_4 |
Gene ID: MGYG000000919_5_44
Type: TC
Location: 52519 - 53172 (-)
Type: TC
Location: 52519 - 53172 (-)
Gene ID: MGYG000000919_5_45
Type: CAZyme
Location: 53239 - 55521 (-)
Type: CAZyme
Location: 53239 - 55521 (-)
Gene ID: MGYG000000919_5_46
Type: TC
Location: 55806 - 56828 (-)
Type: TC
Location: 55806 - 56828 (-)
Gene ID: MGYG000000919_5_47
Type: TC
Location: 56825 - 57880 (-)
Type: TC
Location: 56825 - 57880 (-)
Gene ID: MGYG000000919_5_48
Type: TC
Location: 57873 - 59402 (-)
Type: TC
Location: 57873 - 59402 (-)
Gene ID: MGYG000000919_5_49
Type: TC
Location: 59491 - 60579 (-)
Type: TC
Location: 59491 - 60579 (-)
Gene ID: MGYG000000919_5_50
Type: TC
Location: 60742 - 62199 (-)
Type: TC
Location: 60742 - 62199 (-)
Gene ID: MGYG000000919_5_51
Type: TF
Location: 62201 - 63805 (-)
Type: TF
Location: 62201 - 63805 (-)
Gene ID: MGYG000000919_5_52
Type: TC
Location: 64111 - 64941 (-)
Type: TC
Location: 64111 - 64941 (-)
Gene ID: MGYG000000919_5_53
Type: TC
Location: 64944 - 65846 (-)
Type: TC
Location: 64944 - 65846 (-)
Gene ID: MGYG000000919_5_54
Type: STP
Location: 65871 - 67385 (-)
Type: STP
Location: 65871 - 67385 (-)
Gene ID: MGYG000000919_5_55
Type: CAZyme
Location: 67416 - 68369 (-)
Type: CAZyme
Location: 67416 - 68369 (-)
Gene ID: MGYG000000919_5_56
Type: CAZyme
Location: 68417 - 69922 (-)
Type: CAZyme
Location: 68417 - 69922 (-)
Gene ID: MGYG000000919_5_57
Type: pfam
Location: 69986 - 70240 (-)
Type: pfam
Location: 69986 - 70240 (-)
Gene ID: MGYG000000919_5_58
Type: TF
Location: 70688 - 71614 (-)
Type: TF
Location: 70688 - 71614 (-)
Gene ID: MGYG000000919_5_59
Type: CAZyme
Location: 71711 - 73210 (-)
Type: CAZyme
Location: 71711 - 73210 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.