Cluster: MGYG000000915_CGC42
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000915
- CGC Family ID: CGCFAM_05575
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000915_8 | MGYG000000915_8_110 | 129024 | 129962 | + | GT2 |
| TC | MGYG000000915_8 | MGYG000000915_8_111 | 130122 | 131978 | + | 9.B.18.2.1 |
| TC | MGYG000000915_8 | MGYG000000915_8_112 | 132010 | 132615 | + | 9.B.18.1.3 |
| CAZyme | MGYG000000915_8 | MGYG000000915_8_113 | 132628 | 133713 | + | GH177 |
| NULL(UNKNOWN) | MGYG000000915_8 | MGYG000000915_8_114 | 133851 | 134432 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000000915_8 | MGYG000000915_8_115 | 134453 | 134836 | + | GntR |
| TC | MGYG000000915_8 | MGYG000000915_8_116 | 134838 | 135734 | + | 3.A.1.149.1 |
| NULL(UNKNOWN) | MGYG000000915_8 | MGYG000000915_8_117 | 135715 | 136737 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000915_8 | MGYG000000915_8_118 | 136785 | 138038 | - | 2.A.26.1.5 |
| CAZyme | MGYG000000915_8 | MGYG000000915_8_119 | 138300 | 139322 | + | GT2 |
Gene ID: MGYG000000915_8_110
Type: CAZyme
Location: 129024 - 129962 (+)
Type: CAZyme
Location: 129024 - 129962 (+)
Gene ID: MGYG000000915_8_111
Type: TC
Location: 130122 - 131978 (+)
Type: TC
Location: 130122 - 131978 (+)
Gene ID: MGYG000000915_8_112
Type: TC
Location: 132010 - 132615 (+)
Type: TC
Location: 132010 - 132615 (+)
Gene ID: MGYG000000915_8_113
Type: CAZyme
Location: 132628 - 133713 (+)
Type: CAZyme
Location: 132628 - 133713 (+)
Gene ID: MGYG000000915_8_114
Type:
Location: 133851 - 134432 (+)
Type:
Location: 133851 - 134432 (+)
Gene ID: MGYG000000915_8_115
Type: TF
Location: 134453 - 134836 (+)
Type: TF
Location: 134453 - 134836 (+)
Gene ID: MGYG000000915_8_116
Type: TC
Location: 134838 - 135734 (+)
Type: TC
Location: 134838 - 135734 (+)
Gene ID: MGYG000000915_8_117
Type:
Location: 135715 - 136737 (+)
Type:
Location: 135715 - 136737 (+)
Gene ID: MGYG000000915_8_118
Type: TC
Location: 136785 - 138038 (-)
Type: TC
Location: 136785 - 138038 (-)
Gene ID: MGYG000000915_8_119
Type: CAZyme
Location: 138300 - 139322 (+)
Type: CAZyme
Location: 138300 - 139322 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.