Cluster: MGYG000000915_CGC40
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000915
- CGC Family ID: CGCFAM_09821
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000915_8 | MGYG000000915_8_66 | 76651 | 77262 | + | 9.B.18.1.2 |
| pfam | MGYG000000915_8 | MGYG000000915_8_67 | 77294 | 78607 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| pfam | MGYG000000915_8 | MGYG000000915_8_68 | 78627 | 79475 | + | ATPgrasp_TupA |
| TC | MGYG000000915_8 | MGYG000000915_8_69 | 79501 | 80178 | + | 8.A.3.2.4 |
| STP | MGYG000000915_8 | MGYG000000915_8_70 | 80196 | 80831 | + | CbiA |
| pfam | MGYG000000915_8 | MGYG000000915_8_71 | 80870 | 81736 | + | ATPgrasp_TupA |
| CAZyme | MGYG000000915_8 | MGYG000000915_8_72 | 81764 | 82474 | + | GT32 |
| CAZyme | MGYG000000915_8 | MGYG000000915_8_73 | 82471 | 83436 | + | GT2 |
| TC | MGYG000000915_8 | MGYG000000915_8_74 | 83433 | 84884 | + | 2.A.66.2.16 |
| CAZyme | MGYG000000915_8 | MGYG000000915_8_75 | 84922 | 86004 | + | GT4 |
| NULL(UNKNOWN) | MGYG000000915_8 | MGYG000000915_8_76 | 86052 | 87224 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000000915_8 | MGYG000000915_8_77 | 87482 | 88990 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000915_8 | MGYG000000915_8_78 | 89340 | 90740 | + | 2.A.50.2.1 |
| pfam | MGYG000000915_8 | MGYG000000915_8_79 | 90755 | 92149 | + | ALGX |
| pfam | MGYG000000915_8 | MGYG000000915_8_80 | 92313 | 93269 | - | LytR_cpsA_psr |
| TC | MGYG000000915_8 | MGYG000000915_8_81 | 93903 | 94559 | + | 9.B.18.1.2 |
Gene ID: MGYG000000915_8_66
Type: TC
Location: 76651 - 77262 (+)
Type: TC
Location: 76651 - 77262 (+)
Gene ID: MGYG000000915_8_67
Type: pfam
Location: 77294 - 78607 (+)
Type: pfam
Location: 77294 - 78607 (+)
Gene ID: MGYG000000915_8_68
Type: pfam
Location: 78627 - 79475 (+)
Type: pfam
Location: 78627 - 79475 (+)
Gene ID: MGYG000000915_8_69
Type: TC
Location: 79501 - 80178 (+)
Type: TC
Location: 79501 - 80178 (+)
Gene ID: MGYG000000915_8_70
Type: STP
Location: 80196 - 80831 (+)
Type: STP
Location: 80196 - 80831 (+)
Gene ID: MGYG000000915_8_71
Type: pfam
Location: 80870 - 81736 (+)
Type: pfam
Location: 80870 - 81736 (+)
Gene ID: MGYG000000915_8_72
Type: CAZyme
Location: 81764 - 82474 (+)
Type: CAZyme
Location: 81764 - 82474 (+)
Gene ID: MGYG000000915_8_73
Type: CAZyme
Location: 82471 - 83436 (+)
Type: CAZyme
Location: 82471 - 83436 (+)
Gene ID: MGYG000000915_8_74
Type: TC
Location: 83433 - 84884 (+)
Type: TC
Location: 83433 - 84884 (+)
Gene ID: MGYG000000915_8_75
Type: CAZyme
Location: 84922 - 86004 (+)
Type: CAZyme
Location: 84922 - 86004 (+)
Gene ID: MGYG000000915_8_76
Type:
Location: 86052 - 87224 (+)
Type:
Location: 86052 - 87224 (+)
Gene ID: MGYG000000915_8_77
Type:
Location: 87482 - 88990 (+)
Type:
Location: 87482 - 88990 (+)
Gene ID: MGYG000000915_8_78
Type: TC
Location: 89340 - 90740 (+)
Type: TC
Location: 89340 - 90740 (+)
Gene ID: MGYG000000915_8_79
Type: pfam
Location: 90755 - 92149 (+)
Type: pfam
Location: 90755 - 92149 (+)
Gene ID: MGYG000000915_8_80
Type: pfam
Location: 92313 - 93269 (-)
Type: pfam
Location: 92313 - 93269 (-)
Gene ID: MGYG000000915_8_81
Type: TC
Location: 93903 - 94559 (+)
Type: TC
Location: 93903 - 94559 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.