Cluster: MGYG000000915_CGC39
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000915
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000915_8 | MGYG000000915_8_44 | 51612 | 53195 | + | 4.A.1.1.3 |
| pfam | MGYG000000915_8 | MGYG000000915_8_45 | 53214 | 54575 | + | Lyase_1 | ADSL_C |
| pfam | MGYG000000915_8 | MGYG000000915_8_46 | 54774 | 55535 | + | S6PP | S6PP | Hydrolase_3 |
| CAZyme | MGYG000000915_8 | MGYG000000915_8_47 | 55546 | 56784 | + | CE9 |
| pfam | MGYG000000915_8 | MGYG000000915_8_48 | 56935 | 57651 | + | TAL_FSA |
| TC | MGYG000000915_8 | MGYG000000915_8_49 | 57679 | 58143 | + | 4.A.7.1.1 |
| TC | MGYG000000915_8 | MGYG000000915_8_50 | 58155 | 58436 | + | 4.A.7.1.2 |
| TC | MGYG000000915_8 | MGYG000000915_8_51 | 58479 | 59858 | + | 4.A.7.1.2 |
| TF | MGYG000000915_8 | MGYG000000915_8_52 | 60006 | 62201 | + | HTH_11 | Mga |
| TF | MGYG000000915_8 | MGYG000000915_8_53 | 62541 | 63734 | - | MarR |
| TC | MGYG000000915_8 | MGYG000000915_8_54 | 63947 | 65254 | + | 4.A.3.2.2 |
| NULL(UNKNOWN) | MGYG000000915_8 | MGYG000000915_8_55 | 65322 | 66224 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000915_8 | MGYG000000915_8_56 | 66348 | 66662 | + | 4.A.3.2.8 |
| TC | MGYG000000915_8 | MGYG000000915_8_57 | 66699 | 67019 | + | 4.A.3.2.2 |
| NULL(UNKNOWN) | MGYG000000915_8 | MGYG000000915_8_58 | 67103 | 67675 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000915_8 | MGYG000000915_8_59 | 67992 | 68822 | + | PRD | PRD | CAT_RBD |
| TC | MGYG000000915_8 | MGYG000000915_8_60 | 68972 | 70525 | + | 4.A.1.1.3 |
| CAZyme | MGYG000000915_8 | MGYG000000915_8_61 | 70646 | 71998 | + | GH4 |
Gene ID: MGYG000000915_8_44
Type: TC
Location: 51612 - 53195 (+)
Type: TC
Location: 51612 - 53195 (+)
Gene ID: MGYG000000915_8_45
Type: pfam
Location: 53214 - 54575 (+)
Type: pfam
Location: 53214 - 54575 (+)
Gene ID: MGYG000000915_8_46
Type: pfam
Location: 54774 - 55535 (+)
Type: pfam
Location: 54774 - 55535 (+)
Gene ID: MGYG000000915_8_47
Type: CAZyme
Location: 55546 - 56784 (+)
Type: CAZyme
Location: 55546 - 56784 (+)
Gene ID: MGYG000000915_8_48
Type: pfam
Location: 56935 - 57651 (+)
Type: pfam
Location: 56935 - 57651 (+)
Gene ID: MGYG000000915_8_49
Type: TC
Location: 57679 - 58143 (+)
Type: TC
Location: 57679 - 58143 (+)
Gene ID: MGYG000000915_8_50
Type: TC
Location: 58155 - 58436 (+)
Type: TC
Location: 58155 - 58436 (+)
Gene ID: MGYG000000915_8_51
Type: TC
Location: 58479 - 59858 (+)
Type: TC
Location: 58479 - 59858 (+)
Gene ID: MGYG000000915_8_52
Type: TF
Location: 60006 - 62201 (+)
Type: TF
Location: 60006 - 62201 (+)
Gene ID: MGYG000000915_8_53
Type: TF
Location: 62541 - 63734 (-)
Type: TF
Location: 62541 - 63734 (-)
Gene ID: MGYG000000915_8_54
Type: TC
Location: 63947 - 65254 (+)
Type: TC
Location: 63947 - 65254 (+)
Gene ID: MGYG000000915_8_55
Type:
Location: 65322 - 66224 (+)
Type:
Location: 65322 - 66224 (+)
Gene ID: MGYG000000915_8_56
Type: TC
Location: 66348 - 66662 (+)
Type: TC
Location: 66348 - 66662 (+)
Gene ID: MGYG000000915_8_57
Type: TC
Location: 66699 - 67019 (+)
Type: TC
Location: 66699 - 67019 (+)
Gene ID: MGYG000000915_8_58
Type:
Location: 67103 - 67675 (-)
Type:
Location: 67103 - 67675 (-)
Gene ID: MGYG000000915_8_59
Type: pfam
Location: 67992 - 68822 (+)
Type: pfam
Location: 67992 - 68822 (+)
Gene ID: MGYG000000915_8_60
Type: TC
Location: 68972 - 70525 (+)
Type: TC
Location: 68972 - 70525 (+)
Gene ID: MGYG000000915_8_61
Type: CAZyme
Location: 70646 - 71998 (+)
Type: CAZyme
Location: 70646 - 71998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.