Cluster: MGYG000000915_CGC35
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000915
- CGC Family ID: CGCFAM_01073
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000915_7 | MGYG000000915_7_22 | 24298 | 25506 | + | 3.A.1.1.22 |
| TC | MGYG000000915_7 | MGYG000000915_7_23 | 25572 | 26489 | + | 3.A.1.1.22 |
| TC | MGYG000000915_7 | MGYG000000915_7_24 | 26491 | 27402 | + | 3.A.1.1.26 |
| TF | MGYG000000915_7 | MGYG000000915_7_25 | 27483 | 28505 | + | LacI |
| CAZyme | MGYG000000915_7 | MGYG000000915_7_26 | 28651 | 30129 | + | GH77 |
| pfam | MGYG000000915_7 | MGYG000000915_7_27 | 30269 | 30562 | + | DUF503 |
| TC | MGYG000000915_7 | MGYG000000915_7_28 | 30887 | 31915 | + | 3.A.1.24.2 |
| TC | MGYG000000915_7 | MGYG000000915_7_29 | 31915 | 32550 | + | 3.A.1.24.5 |
| TC | MGYG000000915_7 | MGYG000000915_7_30 | 32801 | 33637 | + | 3.A.1.24.5 |
Gene ID: MGYG000000915_7_22
Type: TC
Location: 24298 - 25506 (+)
Type: TC
Location: 24298 - 25506 (+)
Gene ID: MGYG000000915_7_23
Type: TC
Location: 25572 - 26489 (+)
Type: TC
Location: 25572 - 26489 (+)
Gene ID: MGYG000000915_7_24
Type: TC
Location: 26491 - 27402 (+)
Type: TC
Location: 26491 - 27402 (+)
Gene ID: MGYG000000915_7_25
Type: TF
Location: 27483 - 28505 (+)
Type: TF
Location: 27483 - 28505 (+)
Gene ID: MGYG000000915_7_26
Type: CAZyme
Location: 28651 - 30129 (+)
Type: CAZyme
Location: 28651 - 30129 (+)
Gene ID: MGYG000000915_7_27
Type: pfam
Location: 30269 - 30562 (+)
Type: pfam
Location: 30269 - 30562 (+)
Gene ID: MGYG000000915_7_28
Type: TC
Location: 30887 - 31915 (+)
Type: TC
Location: 30887 - 31915 (+)
Gene ID: MGYG000000915_7_29
Type: TC
Location: 31915 - 32550 (+)
Type: TC
Location: 31915 - 32550 (+)
Gene ID: MGYG000000915_7_30
Type: TC
Location: 32801 - 33637 (+)
Type: TC
Location: 32801 - 33637 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.