Cluster: MGYG000000915_CGC34
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000915
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000915_7 | MGYG000000915_7_4 | 2293 | 3801 | + | 3.A.1.2.17 |
| TC | MGYG000000915_7 | MGYG000000915_7_5 | 3791 | 4870 | + | 3.A.1.2.12 |
| TC | MGYG000000915_7 | MGYG000000915_7_6 | 4873 | 5787 | + | 3.A.1.2.12 |
| pfam | MGYG000000915_7 | MGYG000000915_7_7 | 5789 | 6583 | + | Metallophos | Metallophos_2 |
| pfam | MGYG000000915_7 | MGYG000000915_7_8 | 6775 | 10833 | + | LTD | Big_3 | Bact_surface_Ig-like |
| TC | MGYG000000915_7 | MGYG000000915_7_9 | 11456 | 12739 | + | 2.A.40.7.4 |
| peptidase | MGYG000000915_7 | MGYG000000915_7_10 | 12750 | 14531 | + | M38.UNW |
| TC | MGYG000000915_7 | MGYG000000915_7_11 | 14649 | 15281 | + | 2.A.115.2.7 |
| NULL(UNKNOWN) | MGYG000000915_7 | MGYG000000915_7_12 | 15569 | 15802 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000915_7 | MGYG000000915_7_13 | 15850 | 17256 | + | GH1 |
| TF | MGYG000000915_7 | MGYG000000915_7_14 | 17409 | 18128 | + | HTH_6 |
| CAZyme | MGYG000000915_7 | MGYG000000915_7_15 | 18427 | 19866 | + | GH1 |
| TC | MGYG000000915_7 | MGYG000000915_7_16 | 19894 | 20199 | + | 4.A.3.2.8 |
| TC | MGYG000000915_7 | MGYG000000915_7_17 | 20241 | 21578 | + | 4.A.3.2.9 |
| TC | MGYG000000915_7 | MGYG000000915_7_18 | 21606 | 21920 | + | 4.A.3.2.2 |
Gene ID: MGYG000000915_7_4
Type: TC
Location: 2293 - 3801 (+)
Type: TC
Location: 2293 - 3801 (+)
Gene ID: MGYG000000915_7_5
Type: TC
Location: 3791 - 4870 (+)
Type: TC
Location: 3791 - 4870 (+)
Gene ID: MGYG000000915_7_6
Type: TC
Location: 4873 - 5787 (+)
Type: TC
Location: 4873 - 5787 (+)
Gene ID: MGYG000000915_7_7
Type: pfam
Location: 5789 - 6583 (+)
Type: pfam
Location: 5789 - 6583 (+)
Gene ID: MGYG000000915_7_8
Type: pfam
Location: 6775 - 10833 (+)
Type: pfam
Location: 6775 - 10833 (+)
Gene ID: MGYG000000915_7_9
Type: TC
Location: 11456 - 12739 (+)
Type: TC
Location: 11456 - 12739 (+)
Gene ID: MGYG000000915_7_10
Type: peptidase
Location: 12750 - 14531 (+)
Type: peptidase
Location: 12750 - 14531 (+)
Gene ID: MGYG000000915_7_11
Type: TC
Location: 14649 - 15281 (+)
Type: TC
Location: 14649 - 15281 (+)
Gene ID: MGYG000000915_7_12
Type:
Location: 15569 - 15802 (+)
Type:
Location: 15569 - 15802 (+)
Gene ID: MGYG000000915_7_13
Type: CAZyme
Location: 15850 - 17256 (+)
Type: CAZyme
Location: 15850 - 17256 (+)
Gene ID: MGYG000000915_7_14
Type: TF
Location: 17409 - 18128 (+)
Type: TF
Location: 17409 - 18128 (+)
Gene ID: MGYG000000915_7_15
Type: CAZyme
Location: 18427 - 19866 (+)
Type: CAZyme
Location: 18427 - 19866 (+)
Gene ID: MGYG000000915_7_16
Type: TC
Location: 19894 - 20199 (+)
Type: TC
Location: 19894 - 20199 (+)
Gene ID: MGYG000000915_7_17
Type: TC
Location: 20241 - 21578 (+)
Type: TC
Location: 20241 - 21578 (+)
Gene ID: MGYG000000915_7_18
Type: TC
Location: 21606 - 21920 (+)
Type: TC
Location: 21606 - 21920 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.