Cluster: MGYG000000915_CGC26
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000000915
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000915_6 | MGYG000000915_6_17 | 19138 | 20880 | + | 3.A.1.106.3 |
| TC | MGYG000000915_6 | MGYG000000915_6_18 | 20882 | 22651 | + | 3.A.1.106.3 |
| CAZyme | MGYG000000915_6 | MGYG000000915_6_19 | 22732 | 24030 | - | GH125 |
| pfam | MGYG000000915_6 | MGYG000000915_6_20 | 24178 | 24867 | - | DUF624 |
| TC | MGYG000000915_6 | MGYG000000915_6_21 | 25023 | 26795 | + | 8.A.59.2.1 |
| TF | MGYG000000915_6 | MGYG000000915_6_22 | 26799 | 28319 | + | HTH_AraC |
| TC | MGYG000000915_6 | MGYG000000915_6_23 | 28680 | 29639 | + | 3.A.1.1.10 |
| TC | MGYG000000915_6 | MGYG000000915_6_24 | 29658 | 30626 | + | 3.A.1.1.29 |
| CAZyme | MGYG000000915_6 | MGYG000000915_6_25 | 30689 | 33820 | + | GH38 |
| pfam | MGYG000000915_6 | MGYG000000915_6_26 | 33942 | 36347 | + | Fn3_assoc | CHB_HEX_C_1 |
| CAZyme | MGYG000000915_6 | MGYG000000915_6_27 | 36380 | 38233 | + | GH20 |
| CAZyme | MGYG000000915_6 | MGYG000000915_6_28 | 38251 | 39648 | + | GH1 |
| pfam | MGYG000000915_6 | MGYG000000915_6_29 | 39678 | 40616 | + | PMI_typeI_cat | MPI_cupin_dom |
| pfam | MGYG000000915_6 | MGYG000000915_6_30 | 40643 | 41524 | + | ROK |
| CAZyme | MGYG000000915_6 | MGYG000000915_6_31 | 41647 | 43506 | - | GT2 |
| TC | MGYG000000915_6 | MGYG000000915_6_32 | 44010 | 45353 | + | 2.A.23.1.5 |
Gene ID: MGYG000000915_6_17
Type: TC
Location: 19138 - 20880 (+)
Type: TC
Location: 19138 - 20880 (+)
Gene ID: MGYG000000915_6_18
Type: TC
Location: 20882 - 22651 (+)
Type: TC
Location: 20882 - 22651 (+)
Gene ID: MGYG000000915_6_19
Type: CAZyme
Location: 22732 - 24030 (-)
Type: CAZyme
Location: 22732 - 24030 (-)
Gene ID: MGYG000000915_6_20
Type: pfam
Location: 24178 - 24867 (-)
Type: pfam
Location: 24178 - 24867 (-)
Gene ID: MGYG000000915_6_21
Type: TC
Location: 25023 - 26795 (+)
Type: TC
Location: 25023 - 26795 (+)
Gene ID: MGYG000000915_6_22
Type: TF
Location: 26799 - 28319 (+)
Type: TF
Location: 26799 - 28319 (+)
Gene ID: MGYG000000915_6_23
Type: TC
Location: 28680 - 29639 (+)
Type: TC
Location: 28680 - 29639 (+)
Gene ID: MGYG000000915_6_24
Type: TC
Location: 29658 - 30626 (+)
Type: TC
Location: 29658 - 30626 (+)
Gene ID: MGYG000000915_6_25
Type: CAZyme
Location: 30689 - 33820 (+)
Type: CAZyme
Location: 30689 - 33820 (+)
Gene ID: MGYG000000915_6_26
Type: pfam
Location: 33942 - 36347 (+)
Type: pfam
Location: 33942 - 36347 (+)
Gene ID: MGYG000000915_6_27
Type: CAZyme
Location: 36380 - 38233 (+)
Type: CAZyme
Location: 36380 - 38233 (+)
Gene ID: MGYG000000915_6_28
Type: CAZyme
Location: 38251 - 39648 (+)
Type: CAZyme
Location: 38251 - 39648 (+)
Gene ID: MGYG000000915_6_29
Type: pfam
Location: 39678 - 40616 (+)
Type: pfam
Location: 39678 - 40616 (+)
Gene ID: MGYG000000915_6_30
Type: pfam
Location: 40643 - 41524 (+)
Type: pfam
Location: 40643 - 41524 (+)
Gene ID: MGYG000000915_6_31
Type: CAZyme
Location: 41647 - 43506 (-)
Type: CAZyme
Location: 41647 - 43506 (-)
Gene ID: MGYG000000915_6_32
Type: TC
Location: 44010 - 45353 (+)
Type: TC
Location: 44010 - 45353 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.