Cluster: MGYG000000915_CGC25
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000915
- CGC Family ID: CGCFAM_02824
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000915_5 | MGYG000000915_5_132 | 118868 | 120619 | + | 9.B.34.1.2 |
| TC | MGYG000000915_5 | MGYG000000915_5_133 | 120753 | 122123 | + | 2.A.66.1.28 |
| TC | MGYG000000915_5 | MGYG000000915_5_134 | 122500 | 123030 | + | 2.A.88.4.1 |
| CAZyme | MGYG000000915_5 | MGYG000000915_5_135 | 123110 | 123838 | - | CE4 |
| TC | MGYG000000915_5 | MGYG000000915_5_136 | 124038 | 126281 | + | 9.B.34.1.2 |
| NULL(UNKNOWN) | MGYG000000915_5 | MGYG000000915_5_137 | 126380 | 127111 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000915_5 | MGYG000000915_5_138 | 127236 | 127700 | + | dUTPase |
| TC | MGYG000000915_5 | MGYG000000915_5_139 | 127875 | 129806 | - | 3.A.1.121.4 |
| pfam | MGYG000000915_5 | MGYG000000915_5_140 | 129976 | 131193 | - | PFK |
| TC | MGYG000000915_5 | MGYG000000915_5_141 | 131381 | 131935 | + | 2.A.107.2.1 |
| TF | MGYG000000915_5 | MGYG000000915_5_142 | 132000 | 132410 | + | FUR |
| TC | MGYG000000915_5 | MGYG000000915_5_143 | 132455 | 133255 | - | 3.A.1.15.11 |
| TC | MGYG000000915_5 | MGYG000000915_5_144 | 133277 | 133936 | - | 3.A.1.15.11 |
| pfam | MGYG000000915_5 | MGYG000000915_5_145 | 134150 | 134548 | + | DUF6762 |
| peptidase | MGYG000000915_5 | MGYG000000915_5_146 | 134579 | 136381 | + | M03.UPB |
| TC | MGYG000000915_5 | MGYG000000915_5_147 | 136458 | 137429 | + | 9.B.104.1.3 |
| NULL(UNKNOWN) | MGYG000000915_5 | MGYG000000915_5_148 | 137512 | 138135 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000915_5 | MGYG000000915_5_149 | 138355 | 139701 | + | ELFV_dehydrog | ELFV_dehydrog_N |
| CAZyme | MGYG000000915_5 | MGYG000000915_5_150 | 140009 | 141400 | + | GT2 |
Gene ID: MGYG000000915_5_132
Type: TC
Location: 118868 - 120619 (+)
Type: TC
Location: 118868 - 120619 (+)
Gene ID: MGYG000000915_5_133
Type: TC
Location: 120753 - 122123 (+)
Type: TC
Location: 120753 - 122123 (+)
Gene ID: MGYG000000915_5_134
Type: TC
Location: 122500 - 123030 (+)
Type: TC
Location: 122500 - 123030 (+)
Gene ID: MGYG000000915_5_135
Type: CAZyme
Location: 123110 - 123838 (-)
Type: CAZyme
Location: 123110 - 123838 (-)
Gene ID: MGYG000000915_5_136
Type: TC
Location: 124038 - 126281 (+)
Type: TC
Location: 124038 - 126281 (+)
Gene ID: MGYG000000915_5_137
Type:
Location: 126380 - 127111 (+)
Type:
Location: 126380 - 127111 (+)
Gene ID: MGYG000000915_5_138
Type: pfam
Location: 127236 - 127700 (+)
Type: pfam
Location: 127236 - 127700 (+)
Gene ID: MGYG000000915_5_139
Type: TC
Location: 127875 - 129806 (-)
Type: TC
Location: 127875 - 129806 (-)
Gene ID: MGYG000000915_5_140
Type: pfam
Location: 129976 - 131193 (-)
Type: pfam
Location: 129976 - 131193 (-)
Gene ID: MGYG000000915_5_141
Type: TC
Location: 131381 - 131935 (+)
Type: TC
Location: 131381 - 131935 (+)
Gene ID: MGYG000000915_5_142
Type: TF
Location: 132000 - 132410 (+)
Type: TF
Location: 132000 - 132410 (+)
Gene ID: MGYG000000915_5_143
Type: TC
Location: 132455 - 133255 (-)
Type: TC
Location: 132455 - 133255 (-)
Gene ID: MGYG000000915_5_144
Type: TC
Location: 133277 - 133936 (-)
Type: TC
Location: 133277 - 133936 (-)
Gene ID: MGYG000000915_5_145
Type: pfam
Location: 134150 - 134548 (+)
Type: pfam
Location: 134150 - 134548 (+)
Gene ID: MGYG000000915_5_146
Type: peptidase
Location: 134579 - 136381 (+)
Type: peptidase
Location: 134579 - 136381 (+)
Gene ID: MGYG000000915_5_147
Type: TC
Location: 136458 - 137429 (+)
Type: TC
Location: 136458 - 137429 (+)
Gene ID: MGYG000000915_5_148
Type:
Location: 137512 - 138135 (+)
Type:
Location: 137512 - 138135 (+)
Gene ID: MGYG000000915_5_149
Type: pfam
Location: 138355 - 139701 (+)
Type: pfam
Location: 138355 - 139701 (+)
Gene ID: MGYG000000915_5_150
Type: CAZyme
Location: 140009 - 141400 (+)
Type: CAZyme
Location: 140009 - 141400 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.