Cluster: MGYG000000915_CGC24
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000915
- CGC Family ID: CGCFAM_01052
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000915_5 | MGYG000000915_5_110 | 100380 | 102011 | + | 3.A.1.5.18 |
| TC | MGYG000000915_5 | MGYG000000915_5_111 | 102082 | 103041 | + | 3.A.1.5.20 |
| TC | MGYG000000915_5 | MGYG000000915_5_112 | 103051 | 103980 | + | 3.A.1.5.20 |
| TC | MGYG000000915_5 | MGYG000000915_5_113 | 103995 | 105026 | + | 3.A.1.5.12 |
| TC | MGYG000000915_5 | MGYG000000915_5_114 | 105016 | 106044 | + | 3.A.1.5.29 |
| pfam | MGYG000000915_5 | MGYG000000915_5_115 | 106037 | 106966 | + | DHDPS |
| TC | MGYG000000915_5 | MGYG000000915_5_116 | 106956 | 108581 | + | 3.D.10.1.4 |
| CAZyme | MGYG000000915_5 | MGYG000000915_5_117 | 108586 | 109551 | + | CE7 |
| CAZyme | MGYG000000915_5 | MGYG000000915_5_118 | 109553 | 110509 | + | CE7 |
Gene ID: MGYG000000915_5_110
Type: TC
Location: 100380 - 102011 (+)
Type: TC
Location: 100380 - 102011 (+)
Gene ID: MGYG000000915_5_111
Type: TC
Location: 102082 - 103041 (+)
Type: TC
Location: 102082 - 103041 (+)
Gene ID: MGYG000000915_5_112
Type: TC
Location: 103051 - 103980 (+)
Type: TC
Location: 103051 - 103980 (+)
Gene ID: MGYG000000915_5_113
Type: TC
Location: 103995 - 105026 (+)
Type: TC
Location: 103995 - 105026 (+)
Gene ID: MGYG000000915_5_114
Type: TC
Location: 105016 - 106044 (+)
Type: TC
Location: 105016 - 106044 (+)
Gene ID: MGYG000000915_5_115
Type: pfam
Location: 106037 - 106966 (+)
Type: pfam
Location: 106037 - 106966 (+)
Gene ID: MGYG000000915_5_116
Type: TC
Location: 106956 - 108581 (+)
Type: TC
Location: 106956 - 108581 (+)
Gene ID: MGYG000000915_5_117
Type: CAZyme
Location: 108586 - 109551 (+)
Type: CAZyme
Location: 108586 - 109551 (+)
Gene ID: MGYG000000915_5_118
Type: CAZyme
Location: 109553 - 110509 (+)
Type: CAZyme
Location: 109553 - 110509 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.