Cluster: MGYG000000915_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000915
- CGC Family ID: CGCFAM_01099
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000915_4 | MGYG000000915_4_3 | 2003 | 3742 | + | 8.A.59.2.1 |
| TC | MGYG000000915_4 | MGYG000000915_4_4 | 3987 | 5285 | + | 3.A.1.1.4 |
| TC | MGYG000000915_4 | MGYG000000915_4_5 | 5480 | 6373 | + | 3.A.1.1.4 |
| TC | MGYG000000915_4 | MGYG000000915_4_6 | 6366 | 7172 | + | 3.A.1.1.4 |
| CAZyme | MGYG000000915_4 | MGYG000000915_4_7 | 7189 | 9204 | + | GH42 |
Gene ID: MGYG000000915_4_3
Type: TC
Location: 2003 - 3742 (+)
Type: TC
Location: 2003 - 3742 (+)
Gene ID: MGYG000000915_4_4
Type: TC
Location: 3987 - 5285 (+)
Type: TC
Location: 3987 - 5285 (+)
Gene ID: MGYG000000915_4_5
Type: TC
Location: 5480 - 6373 (+)
Type: TC
Location: 5480 - 6373 (+)
Gene ID: MGYG000000915_4_6
Type: TC
Location: 6366 - 7172 (+)
Type: TC
Location: 6366 - 7172 (+)
Gene ID: MGYG000000915_4_7
Type: CAZyme
Location: 7189 - 9204 (+)
Type: CAZyme
Location: 7189 - 9204 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.