Cluster: MGYG000000915_CGC16
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000915
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000915_3 | MGYG000000915_3_47 | 54610 | 55704 | - | GH170 |
| TC | MGYG000000915_3 | MGYG000000915_3_48 | 55837 | 57198 | - | 4.A.3.2.2 |
| pfam | MGYG000000915_3 | MGYG000000915_3_49 | 57264 | 57578 | - | PTS_IIB |
| NULL(UNKNOWN) | MGYG000000915_3 | MGYG000000915_3_50 | 57626 | 57958 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000915_3 | MGYG000000915_3_51 | 57987 | 58304 | - | 4.A.3.2.8 |
| pfam | MGYG000000915_3 | MGYG000000915_3_52 | 58576 | 61050 | - | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 |
| pfam | MGYG000000915_3 | MGYG000000915_3_53 | 61239 | 62732 | - | FGGY_N | FGGY_C |
| TC | MGYG000000915_3 | MGYG000000915_3_54 | 62750 | 63505 | - | 1.A.8.2.6 |
| pfam | MGYG000000915_3 | MGYG000000915_3_55 | 63592 | 64152 | - | G3P_antiterm |
| TC | MGYG000000915_3 | MGYG000000915_3_56 | 64370 | 65092 | - | 3.A.1.3.25 |
| TC | MGYG000000915_3 | MGYG000000915_3_57 | 65079 | 65759 | - | 3.A.1.3.15 |
| TC | MGYG000000915_3 | MGYG000000915_3_58 | 65777 | 66589 | - | 3.A.1.3.27 |
Gene ID: MGYG000000915_3_47
Type: CAZyme
Location: 54610 - 55704 (-)
Type: CAZyme
Location: 54610 - 55704 (-)
Gene ID: MGYG000000915_3_48
Type: TC
Location: 55837 - 57198 (-)
Type: TC
Location: 55837 - 57198 (-)
Gene ID: MGYG000000915_3_49
Type: pfam
Location: 57264 - 57578 (-)
Type: pfam
Location: 57264 - 57578 (-)
Gene ID: MGYG000000915_3_50
Type:
Location: 57626 - 57958 (-)
Type:
Location: 57626 - 57958 (-)
Gene ID: MGYG000000915_3_51
Type: TC
Location: 57987 - 58304 (-)
Type: TC
Location: 57987 - 58304 (-)
Gene ID: MGYG000000915_3_52
Type: pfam
Location: 58576 - 61050 (-)
Type: pfam
Location: 58576 - 61050 (-)
Gene ID: MGYG000000915_3_53
Type: pfam
Location: 61239 - 62732 (-)
Type: pfam
Location: 61239 - 62732 (-)
Gene ID: MGYG000000915_3_54
Type: TC
Location: 62750 - 63505 (-)
Type: TC
Location: 62750 - 63505 (-)
Gene ID: MGYG000000915_3_55
Type: pfam
Location: 63592 - 64152 (-)
Type: pfam
Location: 63592 - 64152 (-)
Gene ID: MGYG000000915_3_56
Type: TC
Location: 64370 - 65092 (-)
Type: TC
Location: 64370 - 65092 (-)
Gene ID: MGYG000000915_3_57
Type: TC
Location: 65079 - 65759 (-)
Type: TC
Location: 65079 - 65759 (-)
Gene ID: MGYG000000915_3_58
Type: TC
Location: 65777 - 66589 (-)
Type: TC
Location: 65777 - 66589 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.