Cluster: MGYG000000915_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000915
- CGC Family ID: CGCFAM_01703
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000915_3 | MGYG000000915_3_14 | 12996 | 13940 | - | GH113 |
| NULL(UNKNOWN) | MGYG000000915_3 | MGYG000000915_3_15 | 13966 | 14550 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000915_3 | MGYG000000915_3_16 | 14561 | 15415 | - | 3.A.1.1.2 |
| TC | MGYG000000915_3 | MGYG000000915_3_17 | 15415 | 16287 | - | 3.A.1.1.28 |
| STP | MGYG000000915_3 | MGYG000000915_3_18 | 16365 | 17639 | - | SBP_bac_1 |
| pfam | MGYG000000915_3 | MGYG000000915_3_19 | 17892 | 18800 | - | ROK |
| CAZyme | MGYG000000915_3 | MGYG000000915_3_20 | 18847 | 20247 | - | GH1 |
Gene ID: MGYG000000915_3_14
Type: CAZyme
Location: 12996 - 13940 (-)
Type: CAZyme
Location: 12996 - 13940 (-)
Gene ID: MGYG000000915_3_15
Type:
Location: 13966 - 14550 (-)
Type:
Location: 13966 - 14550 (-)
Gene ID: MGYG000000915_3_16
Type: TC
Location: 14561 - 15415 (-)
Type: TC
Location: 14561 - 15415 (-)
Gene ID: MGYG000000915_3_17
Type: TC
Location: 15415 - 16287 (-)
Type: TC
Location: 15415 - 16287 (-)
Gene ID: MGYG000000915_3_18
Type: STP
Location: 16365 - 17639 (-)
Type: STP
Location: 16365 - 17639 (-)
Gene ID: MGYG000000915_3_19
Type: pfam
Location: 17892 - 18800 (-)
Type: pfam
Location: 17892 - 18800 (-)
Gene ID: MGYG000000915_3_20
Type: CAZyme
Location: 18847 - 20247 (-)
Type: CAZyme
Location: 18847 - 20247 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.