Cluster: MGYG000000915_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000915
- CGC Family ID: CGCFAM_08160
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000915_1 | MGYG000000915_1_56 | 61421 | 63856 | + | 3.A.3.5.15 |
| TC | MGYG000000915_1 | MGYG000000915_1_57 | 64157 | 65476 | + | 2.A.3.2.5 |
| TF | MGYG000000915_1 | MGYG000000915_1_58 | 65654 | 68386 | + | TrmB |
| TC | MGYG000000915_1 | MGYG000000915_1_59 | 68572 | 68880 | + | 4.A.3.2.8 |
| TC | MGYG000000915_1 | MGYG000000915_1_60 | 68906 | 69226 | + | 4.A.3.2.2 |
| CAZyme | MGYG000000915_1 | MGYG000000915_1_61 | 69219 | 70310 | + | GH170 |
| TC | MGYG000000915_1 | MGYG000000915_1_62 | 70696 | 72045 | + | 4.A.3.2.2 |
Gene ID: MGYG000000915_1_56
Type: TC
Location: 61421 - 63856 (+)
Type: TC
Location: 61421 - 63856 (+)
Gene ID: MGYG000000915_1_57
Type: TC
Location: 64157 - 65476 (+)
Type: TC
Location: 64157 - 65476 (+)
Gene ID: MGYG000000915_1_58
Type: TF
Location: 65654 - 68386 (+)
Type: TF
Location: 65654 - 68386 (+)
Gene ID: MGYG000000915_1_59
Type: TC
Location: 68572 - 68880 (+)
Type: TC
Location: 68572 - 68880 (+)
Gene ID: MGYG000000915_1_60
Type: TC
Location: 68906 - 69226 (+)
Type: TC
Location: 68906 - 69226 (+)
Gene ID: MGYG000000915_1_61
Type: CAZyme
Location: 69219 - 70310 (+)
Type: CAZyme
Location: 69219 - 70310 (+)
Gene ID: MGYG000000915_1_62
Type: TC
Location: 70696 - 72045 (+)
Type: TC
Location: 70696 - 72045 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium nigeriense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.