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Cluster: MGYG000000896_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000896_8 MGYG000000896_8_56 66540 67334 - 3.A.1.34.1
TC MGYG000000896_8 MGYG000000896_8_57 67327 68250 - 3.A.1.34.1
TC MGYG000000896_8 MGYG000000896_8_58 68455 69435 - 3.A.1.34.1
NULL(UNKNOWN) MGYG000000896_8 MGYG000000896_8_59 69595 70383 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000000896_8 MGYG000000896_8_60 70642 72045 - tRNA-synt_2 | tRNA_anti-codon
TC MGYG000000896_8 MGYG000000896_8_61 72183 74117 - 9.B.97.5.1
TC MGYG000000896_8 MGYG000000896_8_62 74352 74915 - 4.A.1.2.6
peptidase MGYG000000896_8 MGYG000000896_8_63 75162 76064 + S09.UPW
TC MGYG000000896_8 MGYG000000896_8_64 76085 78763 + 9.A.8.1.6
TC MGYG000000896_8 MGYG000000896_8_65 78884 80080 + 2.A.1.2.18
CAZyme MGYG000000896_8 MGYG000000896_8_66 80234 81610 + GH13_20
Gene ID: MGYG000000896_8_56
Type: TC
Location: 66540 - 67334 (-)
Gene ID: MGYG000000896_8_57
Type: TC
Location: 67327 - 68250 (-)
Gene ID: MGYG000000896_8_58
Type: TC
Location: 68455 - 69435 (-)
Gene ID: MGYG000000896_8_59
Type:
Location: 69595 - 70383 (-)
Gene ID: MGYG000000896_8_60
Type: pfam
Location: 70642 - 72045 (-)
Gene ID: MGYG000000896_8_61
Type: TC
Location: 72183 - 74117 (-)
Gene ID: MGYG000000896_8_62
Type: TC
Location: 74352 - 74915 (-)
Gene ID: MGYG000000896_8_63
Type: peptidase
Location: 75162 - 76064 (+)
Gene ID: MGYG000000896_8_64
Type: TC
Location: 76085 - 78763 (+)
Gene ID: MGYG000000896_8_65
Type: TC
Location: 78884 - 80080 (+)
Gene ID: MGYG000000896_8_66
Type: CAZyme
Location: 80234 - 81610 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000896_8_61 vegan > omnivore 1.28526 0.01057
MGYG000000896_8_61 vegetarian > omnivore 1.44283 0.04425

🧭 Explore Read Mapping of CGC

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