Cluster: MGYG000000885_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000885
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000885_3 | MGYG000000885_3_7 | 4337 | 6664 | - | 9.A.8.1.6 |
| TC | MGYG000000885_3 | MGYG000000885_3_8 | 6788 | 7009 | - | 9.A.8.1.6 |
| STP | MGYG000000885_3 | MGYG000000885_3_9 | 7050 | 7292 | - | FeoA |
| STP | MGYG000000885_3 | MGYG000000885_3_10 | 7481 | 7729 | - | PTS-HPr |
| TC | MGYG000000885_3 | MGYG000000885_3_11 | 8151 | 9614 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000000885_3 | MGYG000000885_3_12 | 9768 | 10223 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000885_3 | MGYG000000885_3_13 | 10227 | 13235 | - | GH2 |
Gene ID: MGYG000000885_3_7
Type: TC
Location: 4337 - 6664 (-)
Type: TC
Location: 4337 - 6664 (-)
Gene ID: MGYG000000885_3_8
Type: TC
Location: 6788 - 7009 (-)
Type: TC
Location: 6788 - 7009 (-)
Gene ID: MGYG000000885_3_9
Type: STP
Location: 7050 - 7292 (-)
Type: STP
Location: 7050 - 7292 (-)
Gene ID: MGYG000000885_3_10
Type: STP
Location: 7481 - 7729 (-)
Type: STP
Location: 7481 - 7729 (-)
Gene ID: MGYG000000885_3_11
Type: TC
Location: 8151 - 9614 (-)
Type: TC
Location: 8151 - 9614 (-)
Gene ID: MGYG000000885_3_12
Type:
Location: 9768 - 10223 (-)
Type:
Location: 9768 - 10223 (-)
Gene ID: MGYG000000885_3_13
Type: CAZyme
Location: 10227 - 13235 (-)
Type: CAZyme
Location: 10227 - 13235 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.