Cluster: MGYG000000885_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000885
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000885_2 | MGYG000000885_2_120 | 132933 | 133916 | - | GT2 |
| pfam | MGYG000000885_2 | MGYG000000885_2_121 | 133903 | 135135 | - | Wzy_C |
| CAZyme | MGYG000000885_2 | MGYG000000885_2_122 | 135128 | 136228 | - | GT4 |
| pfam | MGYG000000885_2 | MGYG000000885_2_123 | 136229 | 137329 | - | PS_pyruv_trans |
| CAZyme | MGYG000000885_2 | MGYG000000885_2_124 | 137329 | 138318 | - | GT2 |
| CAZyme | MGYG000000885_2 | MGYG000000885_2_125 | 138341 | 139399 | - | GT4 |
| TC | MGYG000000885_2 | MGYG000000885_2_126 | 139469 | 140182 | - | 9.B.18.1.2 |
Gene ID: MGYG000000885_2_120
Type: CAZyme
Location: 132933 - 133916 (-)
Type: CAZyme
Location: 132933 - 133916 (-)
Gene ID: MGYG000000885_2_121
Type: pfam
Location: 133903 - 135135 (-)
Type: pfam
Location: 133903 - 135135 (-)
Gene ID: MGYG000000885_2_122
Type: CAZyme
Location: 135128 - 136228 (-)
Type: CAZyme
Location: 135128 - 136228 (-)
Gene ID: MGYG000000885_2_123
Type: pfam
Location: 136229 - 137329 (-)
Type: pfam
Location: 136229 - 137329 (-)
Gene ID: MGYG000000885_2_124
Type: CAZyme
Location: 137329 - 138318 (-)
Type: CAZyme
Location: 137329 - 138318 (-)
Gene ID: MGYG000000885_2_125
Type: CAZyme
Location: 138341 - 139399 (-)
Type: CAZyme
Location: 138341 - 139399 (-)
Gene ID: MGYG000000885_2_126
Type: TC
Location: 139469 - 140182 (-)
Type: TC
Location: 139469 - 140182 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.