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Cluster: MGYG000000885_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000885_16 MGYG000000885_16_17 17533 18459 - CE7
TC MGYG000000885_16 MGYG000000885_16_18 18591 19418 - 3.A.1.5.27
TC MGYG000000885_16 MGYG000000885_16_19 19419 21434 - 3.A.1.5.25
TC MGYG000000885_16 MGYG000000885_16_20 21438 22394 - 3.A.1.5.38
TC MGYG000000885_16 MGYG000000885_16_21 22550 24163 - 3.A.1.5.38
pfam MGYG000000885_16 MGYG000000885_16_22 24529 26469 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC MGYG000000885_16 MGYG000000885_16_23 26476 28779 - 2.A.66.4.4
pfam MGYG000000885_16 MGYG000000885_16_24 28783 29283 - tRNA_edit
pfam MGYG000000885_16 MGYG000000885_16_25 29418 32297 - UvrA_DNA-bind | UvrA_inter
TC MGYG000000885_16 MGYG000000885_16_26 32558 33388 + 3.A.1.132.3
Gene ID: MGYG000000885_16_17
Type: CAZyme
Location: 17533 - 18459 (-)
Gene ID: MGYG000000885_16_18
Type: TC
Location: 18591 - 19418 (-)
Gene ID: MGYG000000885_16_19
Type: TC
Location: 19419 - 21434 (-)
Gene ID: MGYG000000885_16_20
Type: TC
Location: 21438 - 22394 (-)
Gene ID: MGYG000000885_16_21
Type: TC
Location: 22550 - 24163 (-)
Gene ID: MGYG000000885_16_22
Type: pfam
Location: 24529 - 26469 (-)
Gene ID: MGYG000000885_16_23
Type: TC
Location: 26476 - 28779 (-)
Gene ID: MGYG000000885_16_24
Type: pfam
Location: 28783 - 29283 (-)
Gene ID: MGYG000000885_16_25
Type: pfam
Location: 29418 - 32297 (-)
Gene ID: MGYG000000885_16_26
Type: TC
Location: 32558 - 33388 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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