Cluster: MGYG000000881_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000881
- CGC Family ID: CGCFAM_00428
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000881_47 | MGYG000000881_47_3 | 1590 | 3323 | + | 3.A.3.4.1 |
| TC | MGYG000000881_47 | MGYG000000881_47_4 | 3320 | 3964 | + | 3.A.3.4.1 |
| sulfatase | MGYG000000881_47 | MGYG000000881_47_5 | 4104 | 5015 | - | S1_7 |
| NULL(UNKNOWN) | MGYG000000881_47 | MGYG000000881_47_6 | 5084 | 5290 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000881_47 | MGYG000000881_47_7 | 5371 | 6750 | - | GH140 |
| TC | MGYG000000881_47 | MGYG000000881_47_8 | 6895 | 8322 | - | 4.A.1.2.11 |
Gene ID: MGYG000000881_47_3
Type: TC
Location: 1590 - 3323 (+)
Type: TC
Location: 1590 - 3323 (+)
Gene ID: MGYG000000881_47_4
Type: TC
Location: 3320 - 3964 (+)
Type: TC
Location: 3320 - 3964 (+)
Gene ID: MGYG000000881_47_5
Type: sulfatase
Location: 4104 - 5015 (-)
Type: sulfatase
Location: 4104 - 5015 (-)
Gene ID: MGYG000000881_47_6
Type:
Location: 5084 - 5290 (+)
Type:
Location: 5084 - 5290 (+)
Gene ID: MGYG000000881_47_7
Type: CAZyme
Location: 5371 - 6750 (-)
Type: CAZyme
Location: 5371 - 6750 (-)
Gene ID: MGYG000000881_47_8
Type: TC
Location: 6895 - 8322 (-)
Type: TC
Location: 6895 - 8322 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900545075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.