Cluster: MGYG000000879_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000879
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000879_20 | MGYG000000879_20_22 | 16599 | 17618 | + | GH109 |
| pfam | MGYG000000879_20 | MGYG000000879_20_23 | 17747 | 18613 | + | AP_endonuc_2 |
| TC | MGYG000000879_20 | MGYG000000879_20_24 | 18761 | 19621 | + | 3.A.1.3.15 |
| TC | MGYG000000879_20 | MGYG000000879_20_25 | 19740 | 21101 | + | 3.A.1.3.16 |
| TC | MGYG000000879_20 | MGYG000000879_20_26 | 21114 | 21866 | + | 3.A.1.3.20 |
Gene ID: MGYG000000879_20_22
Type: CAZyme
Location: 16599 - 17618 (+)
Type: CAZyme
Location: 16599 - 17618 (+)
Gene ID: MGYG000000879_20_23
Type: pfam
Location: 17747 - 18613 (+)
Type: pfam
Location: 17747 - 18613 (+)
Gene ID: MGYG000000879_20_24
Type: TC
Location: 18761 - 19621 (+)
Type: TC
Location: 18761 - 19621 (+)
Gene ID: MGYG000000879_20_25
Type: TC
Location: 19740 - 21101 (+)
Type: TC
Location: 19740 - 21101 (+)
Gene ID: MGYG000000879_20_26
Type: TC
Location: 21114 - 21866 (+)
Type: TC
Location: 21114 - 21866 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.