Cluster: MGYG000000878_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000878
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000878_3 | MGYG000000878_3_37 | 46087 | 48414 | - | 9.A.8.1.6 |
| TC | MGYG000000878_3 | MGYG000000878_3_38 | 48538 | 48759 | - | 9.A.8.1.6 |
| STP | MGYG000000878_3 | MGYG000000878_3_39 | 48799 | 49041 | - | FeoA |
| STP | MGYG000000878_3 | MGYG000000878_3_40 | 49231 | 49479 | - | PTS-HPr |
| TC | MGYG000000878_3 | MGYG000000878_3_41 | 49900 | 51363 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000000878_3 | MGYG000000878_3_42 | 51517 | 51972 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000878_3 | MGYG000000878_3_43 | 51976 | 54984 | - | GH2 |
Gene ID: MGYG000000878_3_37
Type: TC
Location: 46087 - 48414 (-)
Type: TC
Location: 46087 - 48414 (-)
Gene ID: MGYG000000878_3_38
Type: TC
Location: 48538 - 48759 (-)
Type: TC
Location: 48538 - 48759 (-)
Gene ID: MGYG000000878_3_39
Type: STP
Location: 48799 - 49041 (-)
Type: STP
Location: 48799 - 49041 (-)
Gene ID: MGYG000000878_3_40
Type: STP
Location: 49231 - 49479 (-)
Type: STP
Location: 49231 - 49479 (-)
Gene ID: MGYG000000878_3_41
Type: TC
Location: 49900 - 51363 (-)
Type: TC
Location: 49900 - 51363 (-)
Gene ID: MGYG000000878_3_42
Type:
Location: 51517 - 51972 (-)
Type:
Location: 51517 - 51972 (-)
Gene ID: MGYG000000878_3_43
Type: CAZyme
Location: 51976 - 54984 (-)
Type: CAZyme
Location: 51976 - 54984 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902466855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.