Cluster: MGYG000000870_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000870
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000870_21 | MGYG000000870_21_9 | 8294 | 9676 | + | 2.A.47.5.2 |
| TC | MGYG000000870_21 | MGYG000000870_21_10 | 9751 | 12891 | - | 2.A.6.2.16 |
| TC | MGYG000000870_21 | MGYG000000870_21_11 | 12905 | 14062 | - | 2.A.6.2.47 |
| TC | MGYG000000870_21 | MGYG000000870_21_12 | 14174 | 16924 | - | 3.A.3.2.17 |
| NULL(UNKNOWN) | MGYG000000870_21 | MGYG000000870_21_13 | 17085 | 17741 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000870_21 | MGYG000000870_21_14 | 18083 | 20614 | - | GH36 |
Gene ID: MGYG000000870_21_9
Type: TC
Location: 8294 - 9676 (+)
Type: TC
Location: 8294 - 9676 (+)
Gene ID: MGYG000000870_21_10
Type: TC
Location: 9751 - 12891 (-)
Type: TC
Location: 9751 - 12891 (-)
Gene ID: MGYG000000870_21_11
Type: TC
Location: 12905 - 14062 (-)
Type: TC
Location: 12905 - 14062 (-)
Gene ID: MGYG000000870_21_12
Type: TC
Location: 14174 - 16924 (-)
Type: TC
Location: 14174 - 16924 (-)
Gene ID: MGYG000000870_21_13
Type:
Location: 17085 - 17741 (+)
Type:
Location: 17085 - 17741 (+)
Gene ID: MGYG000000870_21_14
Type: CAZyme
Location: 18083 - 20614 (-)
Type: CAZyme
Location: 18083 - 20614 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp004167605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.