Cluster: MGYG000000870_CGC26
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000870
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000870_12 | MGYG000000870_12_60 | 59530 | 60516 | - | 2.A.28.3.4 |
| pfam | MGYG000000870_12 | MGYG000000870_12_61 | 60555 | 61712 | - | tRNA-synt_1b |
| NULL(UNKNOWN) | MGYG000000870_12 | MGYG000000870_12_62 | 61998 | 62195 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000870_12 | MGYG000000870_12_63 | 62280 | 62642 | - | 2.A.7.34.1 |
| TC | MGYG000000870_12 | MGYG000000870_12_64 | 62655 | 63611 | - | 3.A.1.5.22 |
| TC | MGYG000000870_12 | MGYG000000870_12_65 | 63608 | 64522 | - | 3.A.1.5.1 |
| TC | MGYG000000870_12 | MGYG000000870_12_66 | 64528 | 66387 | - | 3.A.1.5.1 |
| CAZyme | MGYG000000870_12 | MGYG000000870_12_67 | 66531 | 68663 | + | GH29 |
Gene ID: MGYG000000870_12_60
Type: TC
Location: 59530 - 60516 (-)
Type: TC
Location: 59530 - 60516 (-)
Gene ID: MGYG000000870_12_61
Type: pfam
Location: 60555 - 61712 (-)
Type: pfam
Location: 60555 - 61712 (-)
Gene ID: MGYG000000870_12_62
Type:
Location: 61998 - 62195 (-)
Type:
Location: 61998 - 62195 (-)
Gene ID: MGYG000000870_12_63
Type: TC
Location: 62280 - 62642 (-)
Type: TC
Location: 62280 - 62642 (-)
Gene ID: MGYG000000870_12_64
Type: TC
Location: 62655 - 63611 (-)
Type: TC
Location: 62655 - 63611 (-)
Gene ID: MGYG000000870_12_65
Type: TC
Location: 63608 - 64522 (-)
Type: TC
Location: 63608 - 64522 (-)
Gene ID: MGYG000000870_12_66
Type: TC
Location: 64528 - 66387 (-)
Type: TC
Location: 64528 - 66387 (-)
Gene ID: MGYG000000870_12_67
Type: CAZyme
Location: 66531 - 68663 (+)
Type: CAZyme
Location: 66531 - 68663 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp004167605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.