Cluster: MGYG000000870_CGC22
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000000870
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000870_9 | MGYG000000870_9_45 | 51781 | 53250 | + | 2.A.114.1.4 |
| pfam | MGYG000000870_9 | MGYG000000870_9_46 | 53529 | 54872 | + | MFS_1 |
| TC | MGYG000000870_9 | MGYG000000870_9_47 | 55012 | 55626 | + | 3.D.1.8.1 |
| NULL(UNKNOWN) | MGYG000000870_9 | MGYG000000870_9_48 | 55658 | 55915 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000870_9 | MGYG000000870_9_49 | 55978 | 57126 | + | CE9 |
| pfam | MGYG000000870_9 | MGYG000000870_9_50 | 57211 | 58254 | + | Biotin_lipoyl | E3_binding |
| peptidase | MGYG000000870_9 | MGYG000000870_9_51 | 58306 | 58869 | + | C56.UNW |
| CAZyme | MGYG000000870_9 | MGYG000000870_9_52 | 58922 | 60010 | - | GT2 |
| CAZyme | MGYG000000870_9 | MGYG000000870_9_53 | 60007 | 61092 | - | GT2 |
| CAZyme | MGYG000000870_9 | MGYG000000870_9_54 | 61108 | 62250 | - | GT2 |
| CAZyme | MGYG000000870_9 | MGYG000000870_9_55 | 62262 | 63374 | - | GT2 |
| CAZyme | MGYG000000870_9 | MGYG000000870_9_56 | 63798 | 64886 | + | GT8 |
| CAZyme | MGYG000000870_9 | MGYG000000870_9_57 | 64975 | 66009 | + | GT8 |
Gene ID: MGYG000000870_9_45
Type: TC
Location: 51781 - 53250 (+)
Type: TC
Location: 51781 - 53250 (+)
Gene ID: MGYG000000870_9_46
Type: pfam
Location: 53529 - 54872 (+)
Type: pfam
Location: 53529 - 54872 (+)
Gene ID: MGYG000000870_9_47
Type: TC
Location: 55012 - 55626 (+)
Type: TC
Location: 55012 - 55626 (+)
Gene ID: MGYG000000870_9_48
Type:
Location: 55658 - 55915 (+)
Type:
Location: 55658 - 55915 (+)
Gene ID: MGYG000000870_9_49
Type: CAZyme
Location: 55978 - 57126 (+)
Type: CAZyme
Location: 55978 - 57126 (+)
Gene ID: MGYG000000870_9_50
Type: pfam
Location: 57211 - 58254 (+)
Type: pfam
Location: 57211 - 58254 (+)
Gene ID: MGYG000000870_9_51
Type: peptidase
Location: 58306 - 58869 (+)
Type: peptidase
Location: 58306 - 58869 (+)
Gene ID: MGYG000000870_9_52
Type: CAZyme
Location: 58922 - 60010 (-)
Type: CAZyme
Location: 58922 - 60010 (-)
Gene ID: MGYG000000870_9_53
Type: CAZyme
Location: 60007 - 61092 (-)
Type: CAZyme
Location: 60007 - 61092 (-)
Gene ID: MGYG000000870_9_54
Type: CAZyme
Location: 61108 - 62250 (-)
Type: CAZyme
Location: 61108 - 62250 (-)
Gene ID: MGYG000000870_9_55
Type: CAZyme
Location: 62262 - 63374 (-)
Type: CAZyme
Location: 62262 - 63374 (-)
Gene ID: MGYG000000870_9_56
Type: CAZyme
Location: 63798 - 64886 (+)
Type: CAZyme
Location: 63798 - 64886 (+)
Gene ID: MGYG000000870_9_57
Type: CAZyme
Location: 64975 - 66009 (+)
Type: CAZyme
Location: 64975 - 66009 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp004167605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000870_9_47 | vegetarian > omnivore | 1.52746 | 0.04220 |
| MGYG000000870_9_47 | vegetarian > vegan | 1.48267 | 0.01794 |