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Cluster: MGYG000000870_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000870_6 MGYG000000870_6_52 61179 62210 - 1.A.33.1.5
CAZyme MGYG000000870_6 MGYG000000870_6_53 62492 65230 + GH2
pfam MGYG000000870_6 MGYG000000870_6_54 65246 65716 + MauE
pfam MGYG000000870_6 MGYG000000870_6_55 65950 66375 - DUF6941
TC MGYG000000870_6 MGYG000000870_6_56 66570 70106 + 3.A.1.204.4
NULL(UNKNOWN) MGYG000000870_6 MGYG000000870_6_57 70281 70916 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000000870_6 MGYG000000870_6_58 71014 72078 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000870_6 MGYG000000870_6_59 72075 72707 + 3.A.1.134.6
Gene ID: MGYG000000870_6_52
Type: TC
Location: 61179 - 62210 (-)
Gene ID: MGYG000000870_6_53
Type: CAZyme
Location: 62492 - 65230 (+)
Gene ID: MGYG000000870_6_54
Type: pfam
Location: 65246 - 65716 (+)
Gene ID: MGYG000000870_6_55
Type: pfam
Location: 65950 - 66375 (-)
Gene ID: MGYG000000870_6_56
Type: TC
Location: 66570 - 70106 (+)
Gene ID: MGYG000000870_6_57
Type:
Location: 70281 - 70916 (+)
Gene ID: MGYG000000870_6_58
Type:
Location: 71014 - 72078 (+)
Gene ID: MGYG000000870_6_59
Type: TC
Location: 72075 - 72707 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000870_6_54 vegetarian > vegan 1.18162 0.01794

🧭 Explore Read Mapping of CGC

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