Cluster: MGYG000000870_CGC15
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000870
- CGC Family ID: CGCFAM_02035
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000870_5 | MGYG000000870_5_98 | 122123 | 124984 | - | GH84 |
| pfam | MGYG000000870_5 | MGYG000000870_5_99 | 125199 | 128264 | - | Autotransporter |
| pfam | MGYG000000870_5 | MGYG000000870_5_100 | 128581 | 131196 | + | DUF2339 | DUF2339 |
| TC | MGYG000000870_5 | MGYG000000870_5_101 | 131255 | 132202 | + | 3.A.1.15.13 |
| NULL(UNKNOWN) | MGYG000000870_5 | MGYG000000870_5_102 | 132199 | 132633 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000870_5 | MGYG000000870_5_103 | 132624 | 133409 | + | 3.A.1.15.12 |
| TC | MGYG000000870_5 | MGYG000000870_5_104 | 133429 | 134289 | + | 3.A.1.15.14 |
| pfam | MGYG000000870_5 | MGYG000000870_5_105 | 134357 | 134893 | + | UVR |
| pfam | MGYG000000870_5 | MGYG000000870_5_106 | 134899 | 135954 | + | ATP-gua_Ptrans |
| TC | MGYG000000870_5 | MGYG000000870_5_107 | 135983 | 138571 | + | 3.A.9.1.2 |
Gene ID: MGYG000000870_5_98
Type: CAZyme
Location: 122123 - 124984 (-)
Type: CAZyme
Location: 122123 - 124984 (-)
Gene ID: MGYG000000870_5_99
Type: pfam
Location: 125199 - 128264 (-)
Type: pfam
Location: 125199 - 128264 (-)
Gene ID: MGYG000000870_5_100
Type: pfam
Location: 128581 - 131196 (+)
Type: pfam
Location: 128581 - 131196 (+)
Gene ID: MGYG000000870_5_101
Type: TC
Location: 131255 - 132202 (+)
Type: TC
Location: 131255 - 132202 (+)
Gene ID: MGYG000000870_5_102
Type:
Location: 132199 - 132633 (+)
Type:
Location: 132199 - 132633 (+)
Gene ID: MGYG000000870_5_103
Type: TC
Location: 132624 - 133409 (+)
Type: TC
Location: 132624 - 133409 (+)
Gene ID: MGYG000000870_5_104
Type: TC
Location: 133429 - 134289 (+)
Type: TC
Location: 133429 - 134289 (+)
Gene ID: MGYG000000870_5_105
Type: pfam
Location: 134357 - 134893 (+)
Type: pfam
Location: 134357 - 134893 (+)
Gene ID: MGYG000000870_5_106
Type: pfam
Location: 134899 - 135954 (+)
Type: pfam
Location: 134899 - 135954 (+)
Gene ID: MGYG000000870_5_107
Type: TC
Location: 135983 - 138571 (+)
Type: TC
Location: 135983 - 138571 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp004167605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000870_5_101 | vegetarian > omnivore | 1.24329 | 0.04220 |
| MGYG000000870_5_101 | vegetarian > vegan | 1.09397 | 0.01794 |