Cluster: MGYG000000870_CGC14
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 13
- Substrate:
- Genome ID: MGYG000000870
- CGC Family ID: CGCFAM_00894
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000870_5 | MGYG000000870_5_72 | 89975 | 91042 | - | GT2 |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_73 | 91048 | 92217 | - | GT4 |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_74 | 92225 | 93121 | - | GT2 |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_75 | 93118 | 94236 | - | GT4 |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_76 | 94233 | 95273 | - | GT2 |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_77 | 95270 | 96382 | - | GT4 |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_78 | 96385 | 97578 | - | GT4 |
| NULL(UNKNOWN) | MGYG000000870_5 | MGYG000000870_5_79 | 97569 | 99083 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_80 | 99080 | 100270 | - | GH105 |
| pfam | MGYG000000870_5 | MGYG000000870_5_81 | 100267 | 101436 | - | PS_pyruv_trans |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_82 | 101429 | 102454 | - | GT2 |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_83 | 102460 | 103611 | - | GT4 |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_84 | 103608 | 104768 | - | GT4 |
| TC | MGYG000000870_5 | MGYG000000870_5_85 | 104784 | 107165 | - | 8.A.3.3.3 |
| TC | MGYG000000870_5 | MGYG000000870_5_86 | 107170 | 107955 | - | 1.B.18.3.8 |
| TC | MGYG000000870_5 | MGYG000000870_5_87 | 107975 | 109957 | - | 9.B.18.2.1 |
| pfam | MGYG000000870_5 | MGYG000000870_5_88 | 109963 | 111750 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 | Beta_elim_lyase | PglD_N |
| TC | MGYG000000870_5 | MGYG000000870_5_89 | 111747 | 112358 | - | 9.B.18.1.2 |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_90 | 112355 | 113476 | - | GT4 |
| NULL(UNKNOWN) | MGYG000000870_5 | MGYG000000870_5_91 | 113473 | 114537 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000870_5 | MGYG000000870_5_92 | 115032 | 116102 | + | GT2 |
Gene ID: MGYG000000870_5_72
Type: CAZyme
Location: 89975 - 91042 (-)
Type: CAZyme
Location: 89975 - 91042 (-)
Gene ID: MGYG000000870_5_73
Type: CAZyme
Location: 91048 - 92217 (-)
Type: CAZyme
Location: 91048 - 92217 (-)
Gene ID: MGYG000000870_5_74
Type: CAZyme
Location: 92225 - 93121 (-)
Type: CAZyme
Location: 92225 - 93121 (-)
Gene ID: MGYG000000870_5_75
Type: CAZyme
Location: 93118 - 94236 (-)
Type: CAZyme
Location: 93118 - 94236 (-)
Gene ID: MGYG000000870_5_76
Type: CAZyme
Location: 94233 - 95273 (-)
Type: CAZyme
Location: 94233 - 95273 (-)
Gene ID: MGYG000000870_5_77
Type: CAZyme
Location: 95270 - 96382 (-)
Type: CAZyme
Location: 95270 - 96382 (-)
Gene ID: MGYG000000870_5_78
Type: CAZyme
Location: 96385 - 97578 (-)
Type: CAZyme
Location: 96385 - 97578 (-)
Gene ID: MGYG000000870_5_79
Type:
Location: 97569 - 99083 (-)
Type:
Location: 97569 - 99083 (-)
Gene ID: MGYG000000870_5_80
Type: CAZyme
Location: 99080 - 100270 (-)
Type: CAZyme
Location: 99080 - 100270 (-)
Gene ID: MGYG000000870_5_81
Type: pfam
Location: 100267 - 101436 (-)
Type: pfam
Location: 100267 - 101436 (-)
Gene ID: MGYG000000870_5_82
Type: CAZyme
Location: 101429 - 102454 (-)
Type: CAZyme
Location: 101429 - 102454 (-)
Gene ID: MGYG000000870_5_83
Type: CAZyme
Location: 102460 - 103611 (-)
Type: CAZyme
Location: 102460 - 103611 (-)
Gene ID: MGYG000000870_5_84
Type: CAZyme
Location: 103608 - 104768 (-)
Type: CAZyme
Location: 103608 - 104768 (-)
Gene ID: MGYG000000870_5_85
Type: TC
Location: 104784 - 107165 (-)
Type: TC
Location: 104784 - 107165 (-)
Gene ID: MGYG000000870_5_86
Type: TC
Location: 107170 - 107955 (-)
Type: TC
Location: 107170 - 107955 (-)
Gene ID: MGYG000000870_5_87
Type: TC
Location: 107975 - 109957 (-)
Type: TC
Location: 107975 - 109957 (-)
Gene ID: MGYG000000870_5_88
Type: pfam
Location: 109963 - 111750 (-)
Type: pfam
Location: 109963 - 111750 (-)
Gene ID: MGYG000000870_5_89
Type: TC
Location: 111747 - 112358 (-)
Type: TC
Location: 111747 - 112358 (-)
Gene ID: MGYG000000870_5_90
Type: CAZyme
Location: 112355 - 113476 (-)
Type: CAZyme
Location: 112355 - 113476 (-)
Gene ID: MGYG000000870_5_91
Type:
Location: 113473 - 114537 (-)
Type:
Location: 113473 - 114537 (-)
Gene ID: MGYG000000870_5_92
Type: CAZyme
Location: 115032 - 116102 (+)
Type: CAZyme
Location: 115032 - 116102 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp004167605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.