Cluster: MGYG000000862_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000862
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000862_9 | MGYG000000862_9_94 | 92492 | 93868 | - | GH13_20 |
| TC | MGYG000000862_9 | MGYG000000862_9_95 | 94022 | 95218 | - | 2.A.1.2.18 |
| TC | MGYG000000862_9 | MGYG000000862_9_96 | 95340 | 97700 | - | 9.A.8.1.6 |
| NULL(UNKNOWN) | MGYG000000862_9 | MGYG000000862_9_97 | 97822 | 98142 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000862_9 | MGYG000000862_9_98 | 98605 | 100068 | - | 2.A.3.2.3 |
Gene ID: MGYG000000862_9_94
Type: CAZyme
Location: 92492 - 93868 (-)
Type: CAZyme
Location: 92492 - 93868 (-)
Gene ID: MGYG000000862_9_95
Type: TC
Location: 94022 - 95218 (-)
Type: TC
Location: 94022 - 95218 (-)
Gene ID: MGYG000000862_9_96
Type: TC
Location: 95340 - 97700 (-)
Type: TC
Location: 95340 - 97700 (-)
Gene ID: MGYG000000862_9_97
Type:
Location: 97822 - 98142 (-)
Type:
Location: 97822 - 98142 (-)
Gene ID: MGYG000000862_9_98
Type: TC
Location: 98605 - 100068 (-)
Type: TC
Location: 98605 - 100068 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902466735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000862_9_98 | vegan > omnivore | 1.36450 | 0.00566 |