Cluster: MGYG000000845_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000845
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000845_1 | MGYG000000845_1_84 | 110829 | 112211 | - | GH4 |
| TC | MGYG000000845_1 | MGYG000000845_1_85 | 112215 | 113831 | - | 4.A.1.1.3 |
| pfam | MGYG000000845_1 | MGYG000000845_1_86 | 113931 | 114785 | - | PRD | PRD | CAT_RBD |
| TC | MGYG000000845_1 | MGYG000000845_1_87 | 114804 | 115316 | - | 4.A.1.2.5 |
| STP | MGYG000000845_1 | MGYG000000845_1_88 | 115660 | 116421 | - | Fer4 |
| TC | MGYG000000845_1 | MGYG000000845_1_89 | 117049 | 119319 | - | 1.I.1.1.3 |
| TC | MGYG000000845_1 | MGYG000000845_1_90 | 119880 | 122216 | + | 3.A.3.5.15 |
Gene ID: MGYG000000845_1_84
Type: CAZyme
Location: 110829 - 112211 (-)
Type: CAZyme
Location: 110829 - 112211 (-)
Gene ID: MGYG000000845_1_85
Type: TC
Location: 112215 - 113831 (-)
Type: TC
Location: 112215 - 113831 (-)
Gene ID: MGYG000000845_1_86
Type: pfam
Location: 113931 - 114785 (-)
Type: pfam
Location: 113931 - 114785 (-)
Gene ID: MGYG000000845_1_87
Type: TC
Location: 114804 - 115316 (-)
Type: TC
Location: 114804 - 115316 (-)
Gene ID: MGYG000000845_1_88
Type: STP
Location: 115660 - 116421 (-)
Type: STP
Location: 115660 - 116421 (-)
Gene ID: MGYG000000845_1_89
Type: TC
Location: 117049 - 119319 (-)
Type: TC
Location: 117049 - 119319 (-)
Gene ID: MGYG000000845_1_90
Type: TC
Location: 119880 - 122216 (+)
Type: TC
Location: 119880 - 122216 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905194675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.