Cluster: MGYG000000845_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000845
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000845_7 | MGYG000000845_7_47 | 59785 | 66198 | - | GH31_18 |
| TF | MGYG000000845_7 | MGYG000000845_7_48 | 66713 | 67153 | - | MarR |
| NULL(UNKNOWN) | MGYG000000845_7 | MGYG000000845_7_49 | 67258 | 67584 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000845_7 | MGYG000000845_7_50 | 67780 | 68607 | - | 4.A.6.1.6 |
| TC | MGYG000000845_7 | MGYG000000845_7_51 | 68607 | 69464 | - | 4.A.6.1.1 |
| TC | MGYG000000845_7 | MGYG000000845_7_52 | 69536 | 70024 | - | 4.A.6.1.9 |
Gene ID: MGYG000000845_7_47
Type: CAZyme
Location: 59785 - 66198 (-)
Type: CAZyme
Location: 59785 - 66198 (-)
Gene ID: MGYG000000845_7_48
Type: TF
Location: 66713 - 67153 (-)
Type: TF
Location: 66713 - 67153 (-)
Gene ID: MGYG000000845_7_49
Type:
Location: 67258 - 67584 (-)
Type:
Location: 67258 - 67584 (-)
Gene ID: MGYG000000845_7_50
Type: TC
Location: 67780 - 68607 (-)
Type: TC
Location: 67780 - 68607 (-)
Gene ID: MGYG000000845_7_51
Type: TC
Location: 68607 - 69464 (-)
Type: TC
Location: 68607 - 69464 (-)
Gene ID: MGYG000000845_7_52
Type: TC
Location: 69536 - 70024 (-)
Type: TC
Location: 69536 - 70024 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905194675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000845_7_47 | vegetarian > omnivore | 1.38287 | 0.03724 |
| MGYG000000845_7_47 | vegetarian > vegan | 2.09596 | 0.01195 |