Cluster: MGYG000000843_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000843
- CGC Family ID: CGCFAM_00403
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000843_18 | MGYG000000843_18_10 | 6943 | 8754 | + | 3.A.3.25.3 |
| TF | MGYG000000843_18 | MGYG000000843_18_11 | 9362 | 10069 | - | GntR |
| TC | MGYG000000843_18 | MGYG000000843_18_12 | 10198 | 10524 | + | 4.A.3.2.4 |
| TC | MGYG000000843_18 | MGYG000000843_18_13 | 10586 | 10915 | + | 4.A.3.2.2 |
| CAZyme | MGYG000000843_18 | MGYG000000843_18_14 | 11255 | 12694 | + | GH1 |
| pfam | MGYG000000843_18 | MGYG000000843_18_15 | 12944 | 13357 | + | DUF1093 |
| TC | MGYG000000843_18 | MGYG000000843_18_16 | 13402 | 14508 | - | 2.A.45.2.6 |
Gene ID: MGYG000000843_18_10
Type: TC
Location: 6943 - 8754 (+)
Type: TC
Location: 6943 - 8754 (+)
Gene ID: MGYG000000843_18_11
Type: TF
Location: 9362 - 10069 (-)
Type: TF
Location: 9362 - 10069 (-)
Gene ID: MGYG000000843_18_12
Type: TC
Location: 10198 - 10524 (+)
Type: TC
Location: 10198 - 10524 (+)
Gene ID: MGYG000000843_18_13
Type: TC
Location: 10586 - 10915 (+)
Type: TC
Location: 10586 - 10915 (+)
Gene ID: MGYG000000843_18_14
Type: CAZyme
Location: 11255 - 12694 (+)
Type: CAZyme
Location: 11255 - 12694 (+)
Gene ID: MGYG000000843_18_15
Type: pfam
Location: 12944 - 13357 (+)
Type: pfam
Location: 12944 - 13357 (+)
Gene ID: MGYG000000843_18_16
Type: TC
Location: 13402 - 14508 (-)
Type: TC
Location: 13402 - 14508 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus suilingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.