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Cluster: MGYG000000843_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000843_16 MGYG000000843_16_38 38536 39225 + 1.C.82.1.1
TF MGYG000000843_16 MGYG000000843_16_39 39281 40126 - HTH_6
TC MGYG000000843_16 MGYG000000843_16_40 40268 41575 + 4.A.3.2.2
CAZyme MGYG000000843_16 MGYG000000843_16_41 41595 43040 + GH1
NULL(UNKNOWN) MGYG000000843_16 MGYG000000843_16_42 43114 43683 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000843_16 MGYG000000843_16_43 43856 45067 + 3.A.1.12.4
TC MGYG000000843_16 MGYG000000843_16_44 45060 45701 + 3.A.1.12.4
TC MGYG000000843_16 MGYG000000843_16_45 45698 46621 + 3.A.1.12.4
TC MGYG000000843_16 MGYG000000843_16_46 46621 47280 + 3.A.1.12.4
Gene ID: MGYG000000843_16_38
Type: TC
Location: 38536 - 39225 (+)
Gene ID: MGYG000000843_16_39
Type: TF
Location: 39281 - 40126 (-)
Gene ID: MGYG000000843_16_40
Type: TC
Location: 40268 - 41575 (+)
Gene ID: MGYG000000843_16_41
Type: CAZyme
Location: 41595 - 43040 (+)
Gene ID: MGYG000000843_16_42
Type:
Location: 43114 - 43683 (-)
Gene ID: MGYG000000843_16_43
Type: TC
Location: 43856 - 45067 (+)
Gene ID: MGYG000000843_16_44
Type: TC
Location: 45060 - 45701 (+)
Gene ID: MGYG000000843_16_45
Type: TC
Location: 45698 - 46621 (+)
Gene ID: MGYG000000843_16_46
Type: TC
Location: 46621 - 47280 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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