Cluster: MGYG000000843_CGC24
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000843
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000843_14 | MGYG000000843_14_37 | 36973 | 38460 | + | GH1 |
| TF | MGYG000000843_14 | MGYG000000843_14_38 | 38763 | 40667 | - | HTH_11 | Mga |
| pfam | MGYG000000843_14 | MGYG000000843_14_39 | 40861 | 41181 | + | PTS_IIB |
| TC | MGYG000000843_14 | MGYG000000843_14_40 | 41196 | 42509 | + | 4.A.3.2.3 |
| TC | MGYG000000843_14 | MGYG000000843_14_41 | 42543 | 42896 | + | 4.A.3.2.2 |
| CAZyme | MGYG000000843_14 | MGYG000000843_14_42 | 42912 | 44363 | + | GH1 |
| pfam | MGYG000000843_14 | MGYG000000843_14_43 | 45124 | 46518 | - | FAD_binding_2 | GIDA | FAD_oxidored | NAD_binding_8 |
| TC | MGYG000000843_14 | MGYG000000843_14_44 | 46515 | 47819 | - | 4.A.3.2.9 |
| TF | MGYG000000843_14 | MGYG000000843_14_45 | 47994 | 48719 | - | GntR |
| CAZyme | MGYG000000843_14 | MGYG000000843_14_46 | 48828 | 50186 | + | GH1 |
| CAZyme | MGYG000000843_14 | MGYG000000843_14_47 | 50557 | 54009 | + | CBM32 | PL8 |
| pfam | MGYG000000843_14 | MGYG000000843_14_48 | 54117 | 55328 | - | Ceramidase_alk |
| TC | MGYG000000843_14 | MGYG000000843_14_49 | 55466 | 56794 | + | 4.A.3.2.6 |
Gene ID: MGYG000000843_14_37
Type: CAZyme
Location: 36973 - 38460 (+)
Type: CAZyme
Location: 36973 - 38460 (+)
Gene ID: MGYG000000843_14_38
Type: TF
Location: 38763 - 40667 (-)
Type: TF
Location: 38763 - 40667 (-)
Gene ID: MGYG000000843_14_39
Type: pfam
Location: 40861 - 41181 (+)
Type: pfam
Location: 40861 - 41181 (+)
Gene ID: MGYG000000843_14_40
Type: TC
Location: 41196 - 42509 (+)
Type: TC
Location: 41196 - 42509 (+)
Gene ID: MGYG000000843_14_41
Type: TC
Location: 42543 - 42896 (+)
Type: TC
Location: 42543 - 42896 (+)
Gene ID: MGYG000000843_14_42
Type: CAZyme
Location: 42912 - 44363 (+)
Type: CAZyme
Location: 42912 - 44363 (+)
Gene ID: MGYG000000843_14_43
Type: pfam
Location: 45124 - 46518 (-)
Type: pfam
Location: 45124 - 46518 (-)
Gene ID: MGYG000000843_14_44
Type: TC
Location: 46515 - 47819 (-)
Type: TC
Location: 46515 - 47819 (-)
Gene ID: MGYG000000843_14_45
Type: TF
Location: 47994 - 48719 (-)
Type: TF
Location: 47994 - 48719 (-)
Gene ID: MGYG000000843_14_46
Type: CAZyme
Location: 48828 - 50186 (+)
Type: CAZyme
Location: 48828 - 50186 (+)
Gene ID: MGYG000000843_14_47
Type: CAZyme
Location: 50557 - 54009 (+)
Type: CAZyme
Location: 50557 - 54009 (+)
Gene ID: MGYG000000843_14_48
Type: pfam
Location: 54117 - 55328 (-)
Type: pfam
Location: 54117 - 55328 (-)
Gene ID: MGYG000000843_14_49
Type: TC
Location: 55466 - 56794 (+)
Type: TC
Location: 55466 - 56794 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus suilingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.