Cluster: MGYG000000843_CGC13
🧬 Cluster Details
- Gene Count: 24
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000843
- CGC Family ID: CGCFAM_10766
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000843_6 | MGYG000000843_6_42 | 40893 | 43079 | + | GH36 |
| NULL(UNKNOWN) | MGYG000000843_6 | MGYG000000843_6_43 | 43182 | 44522 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000843_6 | MGYG000000843_6_44 | 44506 | 45264 | - | 3.A.1.134.8 |
| CAZyme | MGYG000000843_6 | MGYG000000843_6_45 | 45587 | 47173 | - | CBM91 | GH43_11 |
| CAZyme | MGYG000000843_6 | MGYG000000843_6_46 | 47296 | 50502 | - | CBM62 |
| pfam | MGYG000000843_6 | MGYG000000843_6_47 | 50692 | 51858 | - | OrfB_IS605 | Cas12f1-like_TNB | HTH_OrfB_IS605 |
| TF | MGYG000000843_6 | MGYG000000843_6_48 | 52752 | 55340 | + | HTH_5 |
| TC | MGYG000000843_6 | MGYG000000843_6_49 | 55485 | 55979 | + | 4.A.6.1.16 |
| TC | MGYG000000843_6 | MGYG000000843_6_50 | 55982 | 56779 | + | 4.A.6.1.19 |
| TC | MGYG000000843_6 | MGYG000000843_6_51 | 56772 | 57596 | + | 4.A.6.1.19 |
| pfam | MGYG000000843_6 | MGYG000000843_6_52 | 57702 | 58139 | - | Usp |
| TC | MGYG000000843_6 | MGYG000000843_6_53 | 58154 | 59812 | - | 2.A.55.2.6 |
| TC | MGYG000000843_6 | MGYG000000843_6_54 | 60230 | 60898 | + | 2.A.89.3.2 |
| TC | MGYG000000843_6 | MGYG000000843_6_55 | 60945 | 61643 | + | 2.A.89.3.2 |
| STP | MGYG000000843_6 | MGYG000000843_6_56 | 61733 | 62194 | - | NUDIX |
| STP | MGYG000000843_6 | MGYG000000843_6_57 | 62396 | 63679 | + | SBP_bac_1 |
| TC | MGYG000000843_6 | MGYG000000843_6_58 | 63771 | 64178 | - | 4.A.6.1.18 |
| TC | MGYG000000843_6 | MGYG000000843_6_59 | 64274 | 67012 | - | 3.A.23.1.1 |
| TC | MGYG000000843_6 | MGYG000000843_6_60 | 67241 | 67729 | + | 4.A.6.1.18 |
| TC | MGYG000000843_6 | MGYG000000843_6_61 | 67732 | 68544 | + | 4.A.6.1.19 |
| TC | MGYG000000843_6 | MGYG000000843_6_62 | 68541 | 69371 | + | 4.A.6.1.19 |
| pfam | MGYG000000843_6 | MGYG000000843_6_63 | 69382 | 70101 | + | Esterase |
| NULL(UNKNOWN) | MGYG000000843_6 | MGYG000000843_6_64 | 70731 | 73973 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000843_6 | MGYG000000843_6_65 | 74371 | 75576 | + | GH28 |
Gene ID: MGYG000000843_6_42
Type: CAZyme
Location: 40893 - 43079 (+)
Type: CAZyme
Location: 40893 - 43079 (+)
Gene ID: MGYG000000843_6_43
Type:
Location: 43182 - 44522 (-)
Type:
Location: 43182 - 44522 (-)
Gene ID: MGYG000000843_6_44
Type: TC
Location: 44506 - 45264 (-)
Type: TC
Location: 44506 - 45264 (-)
Gene ID: MGYG000000843_6_45
Type: CAZyme
Location: 45587 - 47173 (-)
Type: CAZyme
Location: 45587 - 47173 (-)
Gene ID: MGYG000000843_6_46
Type: CAZyme
Location: 47296 - 50502 (-)
Type: CAZyme
Location: 47296 - 50502 (-)
Gene ID: MGYG000000843_6_47
Type: pfam
Location: 50692 - 51858 (-)
Type: pfam
Location: 50692 - 51858 (-)
Gene ID: MGYG000000843_6_48
Type: TF
Location: 52752 - 55340 (+)
Type: TF
Location: 52752 - 55340 (+)
Gene ID: MGYG000000843_6_49
Type: TC
Location: 55485 - 55979 (+)
Type: TC
Location: 55485 - 55979 (+)
Gene ID: MGYG000000843_6_50
Type: TC
Location: 55982 - 56779 (+)
Type: TC
Location: 55982 - 56779 (+)
Gene ID: MGYG000000843_6_51
Type: TC
Location: 56772 - 57596 (+)
Type: TC
Location: 56772 - 57596 (+)
Gene ID: MGYG000000843_6_52
Type: pfam
Location: 57702 - 58139 (-)
Type: pfam
Location: 57702 - 58139 (-)
Gene ID: MGYG000000843_6_53
Type: TC
Location: 58154 - 59812 (-)
Type: TC
Location: 58154 - 59812 (-)
Gene ID: MGYG000000843_6_54
Type: TC
Location: 60230 - 60898 (+)
Type: TC
Location: 60230 - 60898 (+)
Gene ID: MGYG000000843_6_55
Type: TC
Location: 60945 - 61643 (+)
Type: TC
Location: 60945 - 61643 (+)
Gene ID: MGYG000000843_6_56
Type: STP
Location: 61733 - 62194 (-)
Type: STP
Location: 61733 - 62194 (-)
Gene ID: MGYG000000843_6_57
Type: STP
Location: 62396 - 63679 (+)
Type: STP
Location: 62396 - 63679 (+)
Gene ID: MGYG000000843_6_58
Type: TC
Location: 63771 - 64178 (-)
Type: TC
Location: 63771 - 64178 (-)
Gene ID: MGYG000000843_6_59
Type: TC
Location: 64274 - 67012 (-)
Type: TC
Location: 64274 - 67012 (-)
Gene ID: MGYG000000843_6_60
Type: TC
Location: 67241 - 67729 (+)
Type: TC
Location: 67241 - 67729 (+)
Gene ID: MGYG000000843_6_61
Type: TC
Location: 67732 - 68544 (+)
Type: TC
Location: 67732 - 68544 (+)
Gene ID: MGYG000000843_6_62
Type: TC
Location: 68541 - 69371 (+)
Type: TC
Location: 68541 - 69371 (+)
Gene ID: MGYG000000843_6_63
Type: pfam
Location: 69382 - 70101 (+)
Type: pfam
Location: 69382 - 70101 (+)
Gene ID: MGYG000000843_6_64
Type:
Location: 70731 - 73973 (-)
Type:
Location: 70731 - 73973 (-)
Gene ID: MGYG000000843_6_65
Type: CAZyme
Location: 74371 - 75576 (+)
Type: CAZyme
Location: 74371 - 75576 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus suilingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.