Cluster: MGYG000000835_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000835
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000835_38 | MGYG000000835_38_11 | 11616 | 12845 | + | 2.A.1.2.25 |
| CAZyme | MGYG000000835_38 | MGYG000000835_38_12 | 13089 | 14414 | + | GH4 |
| TC | MGYG000000835_38 | MGYG000000835_38_13 | 14439 | 16019 | + | 4.A.1.1.14 |
| TF | MGYG000000835_38 | MGYG000000835_38_14 | 16097 | 16897 | + | HTH_6 |
| TC | MGYG000000835_38 | MGYG000000835_38_15 | 17090 | 18652 | - | 4.A.1.1.3 |
| CAZyme | MGYG000000835_38 | MGYG000000835_38_16 | 18735 | 20060 | - | GH4 |
Gene ID: MGYG000000835_38_11
Type: TC
Location: 11616 - 12845 (+)
Type: TC
Location: 11616 - 12845 (+)
Gene ID: MGYG000000835_38_12
Type: CAZyme
Location: 13089 - 14414 (+)
Type: CAZyme
Location: 13089 - 14414 (+)
Gene ID: MGYG000000835_38_13
Type: TC
Location: 14439 - 16019 (+)
Type: TC
Location: 14439 - 16019 (+)
Gene ID: MGYG000000835_38_14
Type: TF
Location: 16097 - 16897 (+)
Type: TF
Location: 16097 - 16897 (+)
Gene ID: MGYG000000835_38_15
Type: TC
Location: 17090 - 18652 (-)
Type: TC
Location: 17090 - 18652 (-)
Gene ID: MGYG000000835_38_16
Type: CAZyme
Location: 18735 - 20060 (-)
Type: CAZyme
Location: 18735 - 20060 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp937925265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.