Cluster: MGYG000000833_CGC9
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000833
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000833_5 | MGYG000000833_5_105 | 110931 | 112307 | - | GH13_20 |
| TC | MGYG000000833_5 | MGYG000000833_5_106 | 112490 | 113686 | - | 2.A.1.2.18 |
| TC | MGYG000000833_5 | MGYG000000833_5_107 | 113811 | 116171 | - | 9.A.8.1.6 |
| NULL(UNKNOWN) | MGYG000000833_5 | MGYG000000833_5_108 | 116293 | 116613 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000000833_5 | MGYG000000833_5_109 | 116661 | 117560 | - | S09.UPW |
| TC | MGYG000000833_5 | MGYG000000833_5_110 | 117805 | 118368 | + | 4.A.1.2.6 |
| pfam | MGYG000000833_5 | MGYG000000833_5_111 | 118550 | 119953 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | MGYG000000833_5 | MGYG000000833_5_112 | 120203 | 120988 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000833_5 | MGYG000000833_5_113 | 121149 | 122129 | + | 3.A.1.34.1 |
| TC | MGYG000000833_5 | MGYG000000833_5_114 | 122334 | 123257 | + | 3.A.1.34.1 |
| TC | MGYG000000833_5 | MGYG000000833_5_115 | 123250 | 124044 | + | 3.A.1.34.1 |
| pfam | MGYG000000833_5 | MGYG000000833_5_116 | 124202 | 126232 | + | Metallophos | 5_nucleotid_C |
| TC | MGYG000000833_5 | MGYG000000833_5_117 | 126361 | 127128 | + | 1.A.23.4.2 |
Gene ID: MGYG000000833_5_105
Type: CAZyme
Location: 110931 - 112307 (-)
Type: CAZyme
Location: 110931 - 112307 (-)
Gene ID: MGYG000000833_5_106
Type: TC
Location: 112490 - 113686 (-)
Type: TC
Location: 112490 - 113686 (-)
Gene ID: MGYG000000833_5_107
Type: TC
Location: 113811 - 116171 (-)
Type: TC
Location: 113811 - 116171 (-)
Gene ID: MGYG000000833_5_108
Type:
Location: 116293 - 116613 (-)
Type:
Location: 116293 - 116613 (-)
Gene ID: MGYG000000833_5_109
Type: peptidase
Location: 116661 - 117560 (-)
Type: peptidase
Location: 116661 - 117560 (-)
Gene ID: MGYG000000833_5_110
Type: TC
Location: 117805 - 118368 (+)
Type: TC
Location: 117805 - 118368 (+)
Gene ID: MGYG000000833_5_111
Type: pfam
Location: 118550 - 119953 (+)
Type: pfam
Location: 118550 - 119953 (+)
Gene ID: MGYG000000833_5_112
Type:
Location: 120203 - 120988 (+)
Type:
Location: 120203 - 120988 (+)
Gene ID: MGYG000000833_5_113
Type: TC
Location: 121149 - 122129 (+)
Type: TC
Location: 121149 - 122129 (+)
Gene ID: MGYG000000833_5_114
Type: TC
Location: 122334 - 123257 (+)
Type: TC
Location: 122334 - 123257 (+)
Gene ID: MGYG000000833_5_115
Type: TC
Location: 123250 - 124044 (+)
Type: TC
Location: 123250 - 124044 (+)
Gene ID: MGYG000000833_5_116
Type: pfam
Location: 124202 - 126232 (+)
Type: pfam
Location: 124202 - 126232 (+)
Gene ID: MGYG000000833_5_117
Type: TC
Location: 126361 - 127128 (+)
Type: TC
Location: 126361 - 127128 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp003475325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000833_5_116 | vegan > omnivore | 1.81354 | 0.00566 |
| MGYG000000833_5_116 | vegetarian > omnivore | 1.33506 | 0.01057 |