Cluster: MGYG000000833_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000833
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000833_14 | MGYG000000833_14_71 | 50082 | 51110 | + | GH25 |
| peptidase | MGYG000000833_14 | MGYG000000833_14_72 | 51437 | 52906 | - | S12.UPW |
| TC | MGYG000000833_14 | MGYG000000833_14_73 | 53000 | 54469 | - | 4.A.1.2.6 |
| CAZyme | MGYG000000833_14 | MGYG000000833_14_74 | 54538 | 55869 | - | GH4 |
Gene ID: MGYG000000833_14_71
Type: CAZyme
Location: 50082 - 51110 (+)
Type: CAZyme
Location: 50082 - 51110 (+)
Gene ID: MGYG000000833_14_72
Type: peptidase
Location: 51437 - 52906 (-)
Type: peptidase
Location: 51437 - 52906 (-)
Gene ID: MGYG000000833_14_73
Type: TC
Location: 53000 - 54469 (-)
Type: TC
Location: 53000 - 54469 (-)
Gene ID: MGYG000000833_14_74
Type: CAZyme
Location: 54538 - 55869 (-)
Type: CAZyme
Location: 54538 - 55869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp003475325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000833_14_72 | vegan > omnivore | 5.10374 | 0.00566 |
| MGYG000000833_14_72 | vegetarian > omnivore | 5.40033 | 0.01057 |
| MGYG000000833_14_73 | vegan > omnivore | 16.92005 | 0.00566 |
| MGYG000000833_14_73 | vegetarian > omnivore | 16.28003 | 0.01057 |
| MGYG000000833_14_74 | vegan > omnivore | 2.94863 | 0.00566 |
| MGYG000000833_14_74 | vegetarian > omnivore | 2.16464 | 0.01057 |