Cluster: MGYG000000822_CGC7
🧬 Cluster Details
- Gene Count: 32
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000822
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000822_3 | MGYG000000822_3_84 | 85107 | 86543 | - | GH1 |
| pfam | MGYG000000822_3 | MGYG000000822_3_85 | 86586 | 87494 | - | ROK |
| CAZyme | MGYG000000822_3 | MGYG000000822_3_86 | 88028 | 89734 | - | GH13_31 |
| TC | MGYG000000822_3 | MGYG000000822_3_87 | 89721 | 90137 | - | 4.A.6.1.19 |
| TC | MGYG000000822_3 | MGYG000000822_3_88 | 90148 | 90957 | - | 4.A.6.1.13 |
| TC | MGYG000000822_3 | MGYG000000822_3_89 | 90950 | 91750 | - | 4.A.6.1.13 |
| TC | MGYG000000822_3 | MGYG000000822_3_90 | 91767 | 92234 | - | 4.A.6.1.2 |
| TF | MGYG000000822_3 | MGYG000000822_3_91 | 92289 | 93335 | - | LacI |
| TF | MGYG000000822_3 | MGYG000000822_3_92 | 93483 | 94478 | - | LacI |
| CAZyme | MGYG000000822_3 | MGYG000000822_3_93 | 94489 | 96687 | - | GH31_15 |
| pfam | MGYG000000822_3 | MGYG000000822_3_94 | 96689 | 97105 | - | EIIA-man |
| TC | MGYG000000822_3 | MGYG000000822_3_95 | 97126 | 97983 | - | 4.A.6.1.13 |
| TC | MGYG000000822_3 | MGYG000000822_3_96 | 97973 | 98773 | - | 4.A.6.1.13 |
| TC | MGYG000000822_3 | MGYG000000822_3_97 | 98794 | 99285 | - | 4.A.6.1.13 |
| pfam | MGYG000000822_3 | MGYG000000822_3_98 | 99429 | 99854 | - | EIIA-man |
| TC | MGYG000000822_3 | MGYG000000822_3_99 | 99866 | 100666 | - | 4.A.6.1.5 |
| TC | MGYG000000822_3 | MGYG000000822_3_100 | 100656 | 101462 | - | 4.A.6.1.5 |
| TF | MGYG000000822_3 | MGYG000000822_3_101 | 101500 | 102726 | - | GntR |
| STP | MGYG000000822_3 | MGYG000000822_3_102 | 102978 | 103991 | - | SIS |
| TC | MGYG000000822_3 | MGYG000000822_3_103 | 104020 | 104847 | - | 4.A.6.1.19 |
| TC | MGYG000000822_3 | MGYG000000822_3_104 | 104837 | 105610 | - | 4.A.6.1.19 |
| TC | MGYG000000822_3 | MGYG000000822_3_105 | 105632 | 106102 | - | 4.A.6.1.19 |
| TF | MGYG000000822_3 | MGYG000000822_3_106 | 106147 | 106839 | - | GntR |
| TC | MGYG000000822_3 | MGYG000000822_3_107 | 107020 | 107442 | - | 4.A.6.1.16 |
| STP | MGYG000000822_3 | MGYG000000822_3_108 | 107459 | 108454 | - | SIS |
| STP | MGYG000000822_3 | MGYG000000822_3_109 | 108481 | 109545 | - | SIS | SIS |
| TC | MGYG000000822_3 | MGYG000000822_3_110 | 109562 | 110383 | - | 4.A.6.1.19 |
| TC | MGYG000000822_3 | MGYG000000822_3_111 | 110364 | 111203 | - | 4.A.6.1.19 |
| TC | MGYG000000822_3 | MGYG000000822_3_112 | 111234 | 111698 | - | 4.A.6.1.19 |
| TF | MGYG000000822_3 | MGYG000000822_3_113 | 111712 | 112401 | - | GntR |
| TF | MGYG000000822_3 | MGYG000000822_3_114 | 112401 | 113129 | - | GntR |
| TC | MGYG000000822_3 | MGYG000000822_3_115 | 113427 | 114347 | + | 8.A.5.1.7 |
Gene ID: MGYG000000822_3_84
Type: CAZyme
Location: 85107 - 86543 (-)
Type: CAZyme
Location: 85107 - 86543 (-)
Gene ID: MGYG000000822_3_85
Type: pfam
Location: 86586 - 87494 (-)
Type: pfam
Location: 86586 - 87494 (-)
Gene ID: MGYG000000822_3_86
Type: CAZyme
Location: 88028 - 89734 (-)
Type: CAZyme
Location: 88028 - 89734 (-)
Gene ID: MGYG000000822_3_87
Type: TC
Location: 89721 - 90137 (-)
Type: TC
Location: 89721 - 90137 (-)
Gene ID: MGYG000000822_3_88
Type: TC
Location: 90148 - 90957 (-)
Type: TC
Location: 90148 - 90957 (-)
Gene ID: MGYG000000822_3_89
Type: TC
Location: 90950 - 91750 (-)
Type: TC
Location: 90950 - 91750 (-)
Gene ID: MGYG000000822_3_90
Type: TC
Location: 91767 - 92234 (-)
Type: TC
Location: 91767 - 92234 (-)
Gene ID: MGYG000000822_3_91
Type: TF
Location: 92289 - 93335 (-)
Type: TF
Location: 92289 - 93335 (-)
Gene ID: MGYG000000822_3_92
Type: TF
Location: 93483 - 94478 (-)
Type: TF
Location: 93483 - 94478 (-)
Gene ID: MGYG000000822_3_93
Type: CAZyme
Location: 94489 - 96687 (-)
Type: CAZyme
Location: 94489 - 96687 (-)
Gene ID: MGYG000000822_3_94
Type: pfam
Location: 96689 - 97105 (-)
Type: pfam
Location: 96689 - 97105 (-)
Gene ID: MGYG000000822_3_95
Type: TC
Location: 97126 - 97983 (-)
Type: TC
Location: 97126 - 97983 (-)
Gene ID: MGYG000000822_3_96
Type: TC
Location: 97973 - 98773 (-)
Type: TC
Location: 97973 - 98773 (-)
Gene ID: MGYG000000822_3_97
Type: TC
Location: 98794 - 99285 (-)
Type: TC
Location: 98794 - 99285 (-)
Gene ID: MGYG000000822_3_98
Type: pfam
Location: 99429 - 99854 (-)
Type: pfam
Location: 99429 - 99854 (-)
Gene ID: MGYG000000822_3_99
Type: TC
Location: 99866 - 100666 (-)
Type: TC
Location: 99866 - 100666 (-)
Gene ID: MGYG000000822_3_100
Type: TC
Location: 100656 - 101462 (-)
Type: TC
Location: 100656 - 101462 (-)
Gene ID: MGYG000000822_3_101
Type: TF
Location: 101500 - 102726 (-)
Type: TF
Location: 101500 - 102726 (-)
Gene ID: MGYG000000822_3_102
Type: STP
Location: 102978 - 103991 (-)
Type: STP
Location: 102978 - 103991 (-)
Gene ID: MGYG000000822_3_103
Type: TC
Location: 104020 - 104847 (-)
Type: TC
Location: 104020 - 104847 (-)
Gene ID: MGYG000000822_3_104
Type: TC
Location: 104837 - 105610 (-)
Type: TC
Location: 104837 - 105610 (-)
Gene ID: MGYG000000822_3_105
Type: TC
Location: 105632 - 106102 (-)
Type: TC
Location: 105632 - 106102 (-)
Gene ID: MGYG000000822_3_106
Type: TF
Location: 106147 - 106839 (-)
Type: TF
Location: 106147 - 106839 (-)
Gene ID: MGYG000000822_3_107
Type: TC
Location: 107020 - 107442 (-)
Type: TC
Location: 107020 - 107442 (-)
Gene ID: MGYG000000822_3_108
Type: STP
Location: 107459 - 108454 (-)
Type: STP
Location: 107459 - 108454 (-)
Gene ID: MGYG000000822_3_109
Type: STP
Location: 108481 - 109545 (-)
Type: STP
Location: 108481 - 109545 (-)
Gene ID: MGYG000000822_3_110
Type: TC
Location: 109562 - 110383 (-)
Type: TC
Location: 109562 - 110383 (-)
Gene ID: MGYG000000822_3_111
Type: TC
Location: 110364 - 111203 (-)
Type: TC
Location: 110364 - 111203 (-)
Gene ID: MGYG000000822_3_112
Type: TC
Location: 111234 - 111698 (-)
Type: TC
Location: 111234 - 111698 (-)
Gene ID: MGYG000000822_3_113
Type: TF
Location: 111712 - 112401 (-)
Type: TF
Location: 111712 - 112401 (-)
Gene ID: MGYG000000822_3_114
Type: TF
Location: 112401 - 113129 (-)
Type: TF
Location: 112401 - 113129 (-)
Gene ID: MGYG000000822_3_115
Type: TC
Location: 113427 - 114347 (+)
Type: TC
Location: 113427 - 114347 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Companilactobacillus
Species
Companilactobacillus pabuli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.