Cluster: MGYG000000822_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000822
- CGC Family ID: CGCFAM_06134
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000822_3 | MGYG000000822_3_14 | 17144 | 18304 | - | GH8 |
| CAZyme | MGYG000000822_3 | MGYG000000822_3_15 | 18317 | 19615 | - | GT2 | GT2 |
| NULL(UNKNOWN) | MGYG000000822_3 | MGYG000000822_3_16 | 19608 | 19757 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000000822_3 | MGYG000000822_3_17 | 19772 | 20638 | - | GGDEF |
| TC | MGYG000000822_3 | MGYG000000822_3_18 | 20823 | 22238 | - | 4.A.5.1.4 |
| pfam | MGYG000000822_3 | MGYG000000822_3_19 | 22270 | 22575 | - | PTS_IIB |
| TC | MGYG000000822_3 | MGYG000000822_3_20 | 22593 | 23105 | - | 4.A.5.1.6 |
Gene ID: MGYG000000822_3_14
Type: CAZyme
Location: 17144 - 18304 (-)
Type: CAZyme
Location: 17144 - 18304 (-)
Gene ID: MGYG000000822_3_15
Type: CAZyme
Location: 18317 - 19615 (-)
Type: CAZyme
Location: 18317 - 19615 (-)
Gene ID: MGYG000000822_3_16
Type:
Location: 19608 - 19757 (-)
Type:
Location: 19608 - 19757 (-)
Gene ID: MGYG000000822_3_17
Type: STP
Location: 19772 - 20638 (-)
Type: STP
Location: 19772 - 20638 (-)
Gene ID: MGYG000000822_3_18
Type: TC
Location: 20823 - 22238 (-)
Type: TC
Location: 20823 - 22238 (-)
Gene ID: MGYG000000822_3_19
Type: pfam
Location: 22270 - 22575 (-)
Type: pfam
Location: 22270 - 22575 (-)
Gene ID: MGYG000000822_3_20
Type: TC
Location: 22593 - 23105 (-)
Type: TC
Location: 22593 - 23105 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Companilactobacillus
Species
Companilactobacillus pabuli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.