Cluster: MGYG000000822_CGC2
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000822
- CGC Family ID: CGCFAM_06132
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000822_1 | MGYG000000822_1_96 | 106256 | 107218 | + | 8.A.5.1.4 |
| pfam | MGYG000000822_1 | MGYG000000822_1_97 | 107644 | 108510 | - | Metallophos | Metallophos_2 |
| TC | MGYG000000822_1 | MGYG000000822_1_98 | 108924 | 110732 | - | 2.A.16.2.2 |
| STP | MGYG000000822_1 | MGYG000000822_1_99 | 110791 | 111432 | - | TetR_N |
| TC | MGYG000000822_1 | MGYG000000822_1_100 | 111437 | 112507 | - | 3.A.1.105.6 |
| TC | MGYG000000822_1 | MGYG000000822_1_101 | 112485 | 113222 | - | 3.A.1.102.1 |
| pfam | MGYG000000822_1 | MGYG000000822_1_102 | 113321 | 113815 | - | DNA_binding_1 | Methyltransf_1N |
| CAZyme | MGYG000000822_1 | MGYG000000822_1_103 | 113979 | 115016 | + | GH170 |
| STP | MGYG000000822_1 | MGYG000000822_1_104 | 115021 | 115917 | + | SIS |
| TC | MGYG000000822_1 | MGYG000000822_1_105 | 115921 | 117393 | + | 4.A.1.2.7 |
| TF | MGYG000000822_1 | MGYG000000822_1_106 | 117397 | 118251 | + | HTH_6 |
| TC | MGYG000000822_1 | MGYG000000822_1_107 | 118254 | 118733 | + | 4.A.1.1.1 |
| pfam | MGYG000000822_1 | MGYG000000822_1_108 | 118814 | 119641 | + | Phage_int_SAM_1 | Phage_int_SAM_4 |
| pfam | MGYG000000822_1 | MGYG000000822_1_109 | 119654 | 120223 | + | Lysine_decarbox | LDcluster4 |
| TC | MGYG000000822_1 | MGYG000000822_1_110 | 120483 | 121367 | - | 2.A.7.5.2 |
Gene ID: MGYG000000822_1_96
Type: TC
Location: 106256 - 107218 (+)
Type: TC
Location: 106256 - 107218 (+)
Gene ID: MGYG000000822_1_97
Type: pfam
Location: 107644 - 108510 (-)
Type: pfam
Location: 107644 - 108510 (-)
Gene ID: MGYG000000822_1_98
Type: TC
Location: 108924 - 110732 (-)
Type: TC
Location: 108924 - 110732 (-)
Gene ID: MGYG000000822_1_99
Type: STP
Location: 110791 - 111432 (-)
Type: STP
Location: 110791 - 111432 (-)
Gene ID: MGYG000000822_1_100
Type: TC
Location: 111437 - 112507 (-)
Type: TC
Location: 111437 - 112507 (-)
Gene ID: MGYG000000822_1_101
Type: TC
Location: 112485 - 113222 (-)
Type: TC
Location: 112485 - 113222 (-)
Gene ID: MGYG000000822_1_102
Type: pfam
Location: 113321 - 113815 (-)
Type: pfam
Location: 113321 - 113815 (-)
Gene ID: MGYG000000822_1_103
Type: CAZyme
Location: 113979 - 115016 (+)
Type: CAZyme
Location: 113979 - 115016 (+)
Gene ID: MGYG000000822_1_104
Type: STP
Location: 115021 - 115917 (+)
Type: STP
Location: 115021 - 115917 (+)
Gene ID: MGYG000000822_1_105
Type: TC
Location: 115921 - 117393 (+)
Type: TC
Location: 115921 - 117393 (+)
Gene ID: MGYG000000822_1_106
Type: TF
Location: 117397 - 118251 (+)
Type: TF
Location: 117397 - 118251 (+)
Gene ID: MGYG000000822_1_107
Type: TC
Location: 118254 - 118733 (+)
Type: TC
Location: 118254 - 118733 (+)
Gene ID: MGYG000000822_1_108
Type: pfam
Location: 118814 - 119641 (+)
Type: pfam
Location: 118814 - 119641 (+)
Gene ID: MGYG000000822_1_109
Type: pfam
Location: 119654 - 120223 (+)
Type: pfam
Location: 119654 - 120223 (+)
Gene ID: MGYG000000822_1_110
Type: TC
Location: 120483 - 121367 (-)
Type: TC
Location: 120483 - 121367 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Companilactobacillus
Species
Companilactobacillus pabuli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.