Cluster: MGYG000000822_CGC16
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000822
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000822_13 | MGYG000000822_13_5 | 4767 | 6335 | + | 4.A.1.1.3 |
| STP | MGYG000000822_13 | MGYG000000822_13_6 | 6351 | 7547 | + | Aminotran_1_2 |
| TC | MGYG000000822_13 | MGYG000000822_13_7 | 7560 | 8033 | + | 4.A.1.1.1 |
| pfam | MGYG000000822_13 | MGYG000000822_13_8 | 8052 | 8426 | + | Ribonuc_L-PSP |
| TF | MGYG000000822_13 | MGYG000000822_13_9 | 8772 | 9488 | + | GntR |
| TC | MGYG000000822_13 | MGYG000000822_13_10 | 9522 | 10010 | + | 4.A.6.1.18 |
| TC | MGYG000000822_13 | MGYG000000822_13_11 | 10033 | 10965 | + | 4.A.6.1.18 |
| TC | MGYG000000822_13 | MGYG000000822_13_12 | 10952 | 11770 | + | 4.A.6.1.18 |
| TC | MGYG000000822_13 | MGYG000000822_13_13 | 11784 | 12206 | + | 4.A.6.1.8 |
| NULL(UNKNOWN) | MGYG000000822_13 | MGYG000000822_13_14 | 12199 | 14214 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000000822_13 | MGYG000000822_13_15 | 14242 | 15414 | + | SIS |
| CAZyme | MGYG000000822_13 | MGYG000000822_13_16 | 15527 | 16687 | + | CE9 |
| CAZyme | MGYG000000822_13 | MGYG000000822_13_17 | 16824 | 17984 | + | CE9 |
Gene ID: MGYG000000822_13_5
Type: TC
Location: 4767 - 6335 (+)
Type: TC
Location: 4767 - 6335 (+)
Gene ID: MGYG000000822_13_6
Type: STP
Location: 6351 - 7547 (+)
Type: STP
Location: 6351 - 7547 (+)
Gene ID: MGYG000000822_13_7
Type: TC
Location: 7560 - 8033 (+)
Type: TC
Location: 7560 - 8033 (+)
Gene ID: MGYG000000822_13_8
Type: pfam
Location: 8052 - 8426 (+)
Type: pfam
Location: 8052 - 8426 (+)
Gene ID: MGYG000000822_13_9
Type: TF
Location: 8772 - 9488 (+)
Type: TF
Location: 8772 - 9488 (+)
Gene ID: MGYG000000822_13_10
Type: TC
Location: 9522 - 10010 (+)
Type: TC
Location: 9522 - 10010 (+)
Gene ID: MGYG000000822_13_11
Type: TC
Location: 10033 - 10965 (+)
Type: TC
Location: 10033 - 10965 (+)
Gene ID: MGYG000000822_13_12
Type: TC
Location: 10952 - 11770 (+)
Type: TC
Location: 10952 - 11770 (+)
Gene ID: MGYG000000822_13_13
Type: TC
Location: 11784 - 12206 (+)
Type: TC
Location: 11784 - 12206 (+)
Gene ID: MGYG000000822_13_14
Type:
Location: 12199 - 14214 (+)
Type:
Location: 12199 - 14214 (+)
Gene ID: MGYG000000822_13_15
Type: STP
Location: 14242 - 15414 (+)
Type: STP
Location: 14242 - 15414 (+)
Gene ID: MGYG000000822_13_16
Type: CAZyme
Location: 15527 - 16687 (+)
Type: CAZyme
Location: 15527 - 16687 (+)
Gene ID: MGYG000000822_13_17
Type: CAZyme
Location: 16824 - 17984 (+)
Type: CAZyme
Location: 16824 - 17984 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Companilactobacillus
Species
Companilactobacillus pabuli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.