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Cluster: MGYG000000802_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000802_6 MGYG000000802_6_16 16006 17175 - CE9
STP MGYG000000802_6 MGYG000000802_6_17 17294 18460 - SIS | SIS
TF MGYG000000802_6 MGYG000000802_6_18 18575 19306 - GntR
TC MGYG000000802_6 MGYG000000802_6_19 19492 20574 - 4.A.6.1.4
TC MGYG000000802_6 MGYG000000802_6_20 20564 21364 - 4.A.6.1.4
TC MGYG000000802_6 MGYG000000802_6_21 21455 21937 - 4.A.6.1.4
pfam MGYG000000802_6 MGYG000000802_6_22 21974 22255 - YajC
TC MGYG000000802_6 MGYG000000802_6_23 22255 22698 - 4.A.6.1.16
Gene ID: MGYG000000802_6_16
Type: CAZyme
Location: 16006 - 17175 (-)
Gene ID: MGYG000000802_6_17
Type: STP
Location: 17294 - 18460 (-)
Gene ID: MGYG000000802_6_18
Type: TF
Location: 18575 - 19306 (-)
Gene ID: MGYG000000802_6_19
Type: TC
Location: 19492 - 20574 (-)
Gene ID: MGYG000000802_6_20
Type: TC
Location: 20564 - 21364 (-)
Gene ID: MGYG000000802_6_21
Type: TC
Location: 21455 - 21937 (-)
Gene ID: MGYG000000802_6_22
Type: pfam
Location: 21974 - 22255 (-)
Gene ID: MGYG000000802_6_23
Type: TC
Location: 22255 - 22698 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000802_6_22 vegan > omnivore 1.15012 0.00701

🧭 Explore Read Mapping of CGC

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