Cluster: MGYG000000802_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000802
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000802_5 | MGYG000000802_5_69 | 77437 | 78813 | - | GH13_20 |
| TC | MGYG000000802_5 | MGYG000000802_5_70 | 78968 | 80164 | - | 2.A.1.2.18 |
| TC | MGYG000000802_5 | MGYG000000802_5_71 | 80287 | 82647 | - | 9.A.8.1.6 |
| NULL(UNKNOWN) | MGYG000000802_5 | MGYG000000802_5_72 | 82769 | 83089 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000000802_5 | MGYG000000802_5_73 | 83137 | 84036 | - | S09.UPW |
| TC | MGYG000000802_5 | MGYG000000802_5_74 | 84284 | 84847 | + | 4.A.1.2.6 |
| pfam | MGYG000000802_5 | MGYG000000802_5_75 | 85028 | 86431 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | MGYG000000802_5 | MGYG000000802_5_76 | 86690 | 87475 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000802_5 | MGYG000000802_5_77 | 87636 | 88616 | + | 3.A.1.34.1 |
| TC | MGYG000000802_5 | MGYG000000802_5_78 | 88821 | 89744 | + | 3.A.1.34.1 |
| TC | MGYG000000802_5 | MGYG000000802_5_79 | 89737 | 90531 | + | 3.A.1.34.1 |
| TC | MGYG000000802_5 | MGYG000000802_5_80 | 90866 | 91633 | + | 1.A.23.4.2 |
Gene ID: MGYG000000802_5_69
Type: CAZyme
Location: 77437 - 78813 (-)
Type: CAZyme
Location: 77437 - 78813 (-)
Gene ID: MGYG000000802_5_70
Type: TC
Location: 78968 - 80164 (-)
Type: TC
Location: 78968 - 80164 (-)
Gene ID: MGYG000000802_5_71
Type: TC
Location: 80287 - 82647 (-)
Type: TC
Location: 80287 - 82647 (-)
Gene ID: MGYG000000802_5_72
Type:
Location: 82769 - 83089 (-)
Type:
Location: 82769 - 83089 (-)
Gene ID: MGYG000000802_5_73
Type: peptidase
Location: 83137 - 84036 (-)
Type: peptidase
Location: 83137 - 84036 (-)
Gene ID: MGYG000000802_5_74
Type: TC
Location: 84284 - 84847 (+)
Type: TC
Location: 84284 - 84847 (+)
Gene ID: MGYG000000802_5_75
Type: pfam
Location: 85028 - 86431 (+)
Type: pfam
Location: 85028 - 86431 (+)
Gene ID: MGYG000000802_5_76
Type:
Location: 86690 - 87475 (+)
Type:
Location: 86690 - 87475 (+)
Gene ID: MGYG000000802_5_77
Type: TC
Location: 87636 - 88616 (+)
Type: TC
Location: 87636 - 88616 (+)
Gene ID: MGYG000000802_5_78
Type: TC
Location: 88821 - 89744 (+)
Type: TC
Location: 88821 - 89744 (+)
Gene ID: MGYG000000802_5_79
Type: TC
Location: 89737 - 90531 (+)
Type: TC
Location: 89737 - 90531 (+)
Gene ID: MGYG000000802_5_80
Type: TC
Location: 90866 - 91633 (+)
Type: TC
Location: 90866 - 91633 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900540855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.