Cluster: MGYG000000801_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000801
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000801_25 | MGYG000000801_25_13 | 10926 | 17339 | - | GH31_18 |
| TF | MGYG000000801_25 | MGYG000000801_25_14 | 17846 | 18286 | - | MarR |
| NULL(UNKNOWN) | MGYG000000801_25 | MGYG000000801_25_15 | 18392 | 18718 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000801_25 | MGYG000000801_25_16 | 18915 | 19742 | - | 4.A.6.1.6 |
| TC | MGYG000000801_25 | MGYG000000801_25_17 | 19742 | 20599 | - | 4.A.6.1.1 |
| TC | MGYG000000801_25 | MGYG000000801_25_18 | 20672 | 21160 | - | 4.A.6.1.9 |
Gene ID: MGYG000000801_25_13
Type: CAZyme
Location: 10926 - 17339 (-)
Type: CAZyme
Location: 10926 - 17339 (-)
Gene ID: MGYG000000801_25_14
Type: TF
Location: 17846 - 18286 (-)
Type: TF
Location: 17846 - 18286 (-)
Gene ID: MGYG000000801_25_15
Type:
Location: 18392 - 18718 (-)
Type:
Location: 18392 - 18718 (-)
Gene ID: MGYG000000801_25_16
Type: TC
Location: 18915 - 19742 (-)
Type: TC
Location: 18915 - 19742 (-)
Gene ID: MGYG000000801_25_17
Type: TC
Location: 19742 - 20599 (-)
Type: TC
Location: 19742 - 20599 (-)
Gene ID: MGYG000000801_25_18
Type: TC
Location: 20672 - 21160 (-)
Type: TC
Location: 20672 - 21160 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900542325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000801_25_13 | vegetarian > omnivore | 1.43869 | 0.03847 |
| MGYG000000801_25_13 | vegetarian > vegan | 2.05350 | 0.01195 |