Cluster: MGYG000000801_CGC12
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000801
- CGC Family ID: CGCFAM_01453
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000801_21 | MGYG000000801_21_16 | 14316 | 14999 | - | 9.B.149.1.11 |
| NULL(UNKNOWN) | MGYG000000801_21 | MGYG000000801_21_17 | 15009 | 15305 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000801_21 | MGYG000000801_21_18 | 15292 | 17325 | - | 3.A.1.121.4 |
| pfam | MGYG000000801_21 | MGYG000000801_21_19 | 17631 | 18320 | - | TPK_catalytic | TPK_B1_binding |
| pfam | MGYG000000801_21 | MGYG000000801_21_20 | 18330 | 19019 | - | Hydrolase | HAD_2 |
| CAZyme | MGYG000000801_21 | MGYG000000801_21_21 | 19259 | 21655 | + | CBM48 | GH13_9 |
| CAZyme | MGYG000000801_21 | MGYG000000801_21_22 | 21750 | 24176 | + | GT35 |
| pfam | MGYG000000801_21 | MGYG000000801_21_23 | 24281 | 25429 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000000801_21 | MGYG000000801_21_24 | 25434 | 26561 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000000801_21 | MGYG000000801_21_25 | 26652 | 28982 | + | GT5 |
| CAZyme | MGYG000000801_21 | MGYG000000801_21_26 | 29199 | 32495 | + | GH13_39 | GH77 |
Gene ID: MGYG000000801_21_16
Type: TC
Location: 14316 - 14999 (-)
Type: TC
Location: 14316 - 14999 (-)
Gene ID: MGYG000000801_21_17
Type:
Location: 15009 - 15305 (-)
Type:
Location: 15009 - 15305 (-)
Gene ID: MGYG000000801_21_18
Type: TC
Location: 15292 - 17325 (-)
Type: TC
Location: 15292 - 17325 (-)
Gene ID: MGYG000000801_21_19
Type: pfam
Location: 17631 - 18320 (-)
Type: pfam
Location: 17631 - 18320 (-)
Gene ID: MGYG000000801_21_20
Type: pfam
Location: 18330 - 19019 (-)
Type: pfam
Location: 18330 - 19019 (-)
Gene ID: MGYG000000801_21_21
Type: CAZyme
Location: 19259 - 21655 (+)
Type: CAZyme
Location: 19259 - 21655 (+)
Gene ID: MGYG000000801_21_22
Type: CAZyme
Location: 21750 - 24176 (+)
Type: CAZyme
Location: 21750 - 24176 (+)
Gene ID: MGYG000000801_21_23
Type: pfam
Location: 24281 - 25429 (+)
Type: pfam
Location: 24281 - 25429 (+)
Gene ID: MGYG000000801_21_24
Type: pfam
Location: 25434 - 26561 (+)
Type: pfam
Location: 25434 - 26561 (+)
Gene ID: MGYG000000801_21_25
Type: CAZyme
Location: 26652 - 28982 (+)
Type: CAZyme
Location: 26652 - 28982 (+)
Gene ID: MGYG000000801_21_26
Type: CAZyme
Location: 29199 - 32495 (+)
Type: CAZyme
Location: 29199 - 32495 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900542325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.