Cluster: MGYG000000798_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000798
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000798_6 | MGYG000000798_6_9 | 13716 | 15092 | - | GH13_20 |
| TC | MGYG000000798_6 | MGYG000000798_6_10 | 15246 | 16442 | - | 2.A.1.2.18 |
| TC | MGYG000000798_6 | MGYG000000798_6_11 | 16567 | 18927 | - | 9.A.8.1.6 |
| NULL(UNKNOWN) | MGYG000000798_6 | MGYG000000798_6_12 | 19049 | 19369 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000000798_6 | MGYG000000798_6_13 | 19417 | 20316 | - | S09.UPW |
| TC | MGYG000000798_6 | MGYG000000798_6_14 | 20563 | 21126 | + | 4.A.1.2.6 |
| pfam | MGYG000000798_6 | MGYG000000798_6_15 | 21307 | 22710 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | MGYG000000798_6 | MGYG000000798_6_16 | 22960 | 23745 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000798_6 | MGYG000000798_6_17 | 23906 | 24886 | + | 3.A.1.34.1 |
| TC | MGYG000000798_6 | MGYG000000798_6_18 | 25091 | 26014 | + | 3.A.1.34.1 |
| TC | MGYG000000798_6 | MGYG000000798_6_19 | 26007 | 26801 | + | 3.A.1.34.1 |
| TC | MGYG000000798_6 | MGYG000000798_6_20 | 26949 | 27716 | + | 1.A.23.4.2 |
Gene ID: MGYG000000798_6_9
Type: CAZyme
Location: 13716 - 15092 (-)
Type: CAZyme
Location: 13716 - 15092 (-)
Gene ID: MGYG000000798_6_10
Type: TC
Location: 15246 - 16442 (-)
Type: TC
Location: 15246 - 16442 (-)
Gene ID: MGYG000000798_6_11
Type: TC
Location: 16567 - 18927 (-)
Type: TC
Location: 16567 - 18927 (-)
Gene ID: MGYG000000798_6_12
Type:
Location: 19049 - 19369 (-)
Type:
Location: 19049 - 19369 (-)
Gene ID: MGYG000000798_6_13
Type: peptidase
Location: 19417 - 20316 (-)
Type: peptidase
Location: 19417 - 20316 (-)
Gene ID: MGYG000000798_6_14
Type: TC
Location: 20563 - 21126 (+)
Type: TC
Location: 20563 - 21126 (+)
Gene ID: MGYG000000798_6_15
Type: pfam
Location: 21307 - 22710 (+)
Type: pfam
Location: 21307 - 22710 (+)
Gene ID: MGYG000000798_6_16
Type:
Location: 22960 - 23745 (+)
Type:
Location: 22960 - 23745 (+)
Gene ID: MGYG000000798_6_17
Type: TC
Location: 23906 - 24886 (+)
Type: TC
Location: 23906 - 24886 (+)
Gene ID: MGYG000000798_6_18
Type: TC
Location: 25091 - 26014 (+)
Type: TC
Location: 25091 - 26014 (+)
Gene ID: MGYG000000798_6_19
Type: TC
Location: 26007 - 26801 (+)
Type: TC
Location: 26007 - 26801 (+)
Gene ID: MGYG000000798_6_20
Type: TC
Location: 26949 - 27716 (+)
Type: TC
Location: 26949 - 27716 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900542945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.